KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBC5490
Entry
CNBC5490          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cnb03016]
    CNBC5490
Enzymes [BR:cnb01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     CNBC5490
Transfer RNA biogenesis [BR:cnb03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    CNBC5490
SSDB
Motif
Pfam: tRNA_int_endo TAF4
Other DBs
NCBI-GeneID: 4935214
NCBI-ProteinID: XP_776495
Position
3:1593459..1594560
AA seq 325 aa
MSPPPHSIPLYLVNGVATVWDAQTAATLHCVHNVSGLRAGTLPGVAQQNGFLGLPLTLMQ
EETAYLVTQGIAHLVPLDPSPSTPSDETVKAHTAARVARLKALEEKTREAEAKRLEESKK
AFDKGGEKARLKREARARAKAEKAKESGEGLFAEDVKENVTAPIVVSPAKTKTKHAGAPA
AGHFHIVPSHPVLSQHPPESQSITSLPHPLFPFPTTPRQCALLGVFSKLQSLSYRVGLGP
RFGGEWLIYPGDYLRYHAHFTSQVIVRDEPIRPTEIVAWGRLGTGTKKAGLICCWDDGKR
EDGQDDQGGKEEDVEFYSLEWANFG
NT seq 978 nt   +upstreamnt  +downstreamnt
atgtcccctcccccccactccatccccctctacctcgtaaacggtgtcgccaccgtctgg
gacgcacaaactgccgcgactctccattgcgtgcacaatgtctctggtttaagagccggc
acactgccaggcgtagcccagcagaatggatttttaggtcttcccctgacattgatgcag
gaagagactgcataccttgttacccaaggcatcgcccatctcgttcctcttgatcccagc
ccatctacaccctctgacgaaaccgttaaagcccatacggcagcccgcgtcgcgcgtttg
aaagctttagaagaaaagacaagggaggcggaagcaaagagattggaagaatcgaaaaaa
gctttcgataaagggggagaaaaagcgaggctgaagagggaggcgagggcgagagcaaaa
gcagaaaaggctaaagaaagtggggaaggactgttcgcagaagacgtcaaggagaatgtc
actgcacccatagtggtttcaccggcaaagaccaagaccaagcacgccggcgcgcctgct
gctggccactttcacattgtcccctcccacccagtattatctcaacatccaccagaatca
caatcgataacatccctcccccaccctctcttccccttcccaacaaccccgcgccaatgt
gcccttctcggcgtattttccaagcttcagtcgctctcataccgggtcggacttggtccg
cggtttggtggagaatggttaatttatccaggagactacttgcggtatcatgcgcatttt
accagccaggtcatcgttcgagatgaacctatcagaccgaccgagattgtggcgtggggt
aggttgggtacagggacgaaaaaagctggattaatttgttgctgggatgatggtaagaga
gaagacggacaagatgaccaagggggaaaagaagaggatgtggaattctactcgcttgaa
tgggccaactttggatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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