KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBJ1480
Entry
CNBJ1480          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K14568  rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CNBJ1480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cnb03009]
    CNBJ1480
Enzymes [BR:cnb01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.260  rRNA small subunit pseudouridine methyltransferase Nep1
     CNBJ1480
Ribosome biogenesis [BR:cnb03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    CNBJ1480
SSDB
Motif
Pfam: EMG1
Other DBs
NCBI-GeneID: 4938489
NCBI-ProteinID: XP_773153
Position
10:508452..509787
AA seq 334 aa
MSDTPSSDTPPKRRAADTTAVPPQKSSKMSATAPPFNPTRPLTKKPAASFHDIAQEFKPK
VKTEEVEDAMEVDKEAEGSARVTKPLPGGKRNVQRADFVPVQASVPKSTEDKENTRRLIV
VLSQACLEAYKISSGSAGKSSAKEAKYALLNCDDHQGILAKTGRDIADARPDITHQCLLT
LLDSPLNKAGLLQVYIHTAKGVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRGVNGSEK
LLRVIKNPITDHLPTNCIKLTLSADAPTVRLSKYLNTLPESHSVCVFVGAMARGADNFAD
QFVDQKVSISDYSLSASVACGKFCCAMEEIWDIV
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgtcagacaccccttcctcagacacccctcccaaacgacgtgctgccgataccaccgcc
gttcctcctcaaaaatcttccaaaatgtccgcgacagctcctcccttcaatcctactcgc
cctttaacgaaaaaacctgctgcttcattccacgatatcgcccaggaattcaagcccaaa
gtcaaaactgaggaagtagaggacgctatggaggtggataaggaagcggagggttctgcg
agggttacaaagcctctgcctggtgggaagagaaacgtacagagggcggactttgtaccc
gtccaggcttctgtgcctaagtctactgaggacaaggagaataccagaagattgattgtt
gtgctttcacaagcttgcctcgaagcatacaagatttcgtctggctcggcaggcaagagc
tctgcaaaagaagcaaagtacgctttattgaactgtgacgaccatcagggaatcttggcc
aagacaggtagagatattgccgatgctcgacctgacatcacacatcaatgccttttgacc
cttcttgactctcctctcaacaaagccggcctcttgcaggtgtatatccatacggcaaag
ggtgtattgatcgaggtgaaccctagtgttaggataccgcgaaccttcaagcgtttttct
gggttgatggttcaattgcttcacaaactttccataaggggtgttaacggtagcgagaag
cttttgagagttatcaagaaccctatcactgatcaccttcctaccaactgcatcaaactt
accctttccgccgatgccccaactgttcgattgtccaagtaccttaatactcttcctgag
tcccattctgtctgtgtcttcgttggtgccatggctagaggagcggacaactttgcagac
caatttgttgaccaaaaggtctcaatcagcgattacagtctttcggcgtctgtggcatgt
gggaagttctgctgtgcgatggaggagatttgggacattgtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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