KEGG   Cryptococcus neoformans var. neoformans B-3501A: CNBK0960
Entry
CNBK0960          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
cnb  Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CNBK0960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnb03400]
    CNBK0960
DNA repair and recombination proteins [BR:cnb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     CNBK0960
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV AAA_29 Chlorophyllase
Other DBs
NCBI-GeneID: 4938792
NCBI-ProteinID: XP_772722
Position
11:complement(281531..285795)
AA seq 1205 aa
MPSAKQATLAAFFGAPKPGPRPSQPRSSQLKSSPASTLRTPSTSVAGSSPVQAKSSRPAP
GSSIKRSSPLKQPEPSSEITAIEDEDDELTPPPKSDVSDATTVGESSSGKKQDEDEEMDD
DEPPIVTGRRAKRKVVYVDPDSDDDSEGEVKPKASNGRRPRKSLKEDSEDEYMFDEADDA
AMAAALDDFEANKLSPSKSPSPPRKITKAKATPSASSKKPTTTPIRPGPKPIANKGSESS
SFLTAAERKKIQAKEDKRESEQCFDFLVNIRDKEGNRPDDPDYDKRSILIPKKSWAEFTP
FEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPEQSLE
FWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGTIVDSGYL
NSDDPNHLVSIKESSGSPEGISSFGICIADASTGEFSISFFEDDVCRTRLETMFRQIRPK
ELIHAKGNLSVTTTRLLRNILPSSTAWQSFRDGKEFYTAEDTLSLLPSIFSNEQGQITIP
EAITSLQDNALAMESLGGMLFYLKSLNLDKDLFSQRNFNIYDPIKEGKNLILDGKTLGHM
EVLVNNEGGIEGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDLMNHPRF
SGDFTQLCKGLPDLERLISRIHAGSVKQSDFLQVVESFSKLQKGIDNLIDMSESLESTGV
KALLRSAPDLSGMIQHIRGMYTIEQNEKTIAILPNPGADEECDAADAEVERIEEELNEIL
EEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVKAPARWTKASGTKSHNRYYTPETIPVI
RQIQEARETQAAAKKNFFKHLMDEFSKDRETWLITVRVIAELDCLVSLAKASSDMDEPKC
RPTFVSSSSAFIDFRDLRHPSMCLRSDFISNDVQLGGDQPRQVLLTGPNMAGKSTLLRMT
AAGVIMAQLGCYVPASEARLSPVDKIQTRMGAYDNMFASASTFKVELDECSRILREAGPK
SLVILDELGRGTSTYDGMAIAGAVLHHIATHSLPLGFFATHYGSLTDDFAYHPNIRRMHM
QTHVDDEQKQVVFLYKLIPGVAESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFNDKLV
NRRQSKMPIVAQADFAWLMRVVKGLEGAVAGSQDKKGILGGHEATLADQLDIVERCAGGY
EIAEA
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgcccagcgctaagcaggccaccctcgctgccttcttcggcgcacccaagccaggccca
agaccgtcccagccaaggtcttcacagctcaagtcgtccccagcctccaccctccgcacc
ccttcaacctctgtcgctggcagctcgcctgtccaagcaaagtcttcccggccggccccc
ggcagcagcatcaagaggagtagtccactgaagcaacccgagccgtcatcagaaatcact
gcgatcgaggatgaagatgatgagctcaccccgccgcccaagagtgacgtatctgacgct
accacggtcggagagagctcaagtggcaagaaacaggatgaggatgaggagatggacgat
gatgagccgcctatcgtgactggccgacgggcaaagcgaaaggttgtctatgttgatccc
gacagcgacgatgactctgaaggcgaggttaagcctaaagcaagtaatggtagaaggcca
cgaaaaagtctaaaggaggattctgaggacgagtacatgtttgacgaagcggacgatgct
gctatggctgctgctctggacgatttcgaggccaacaaactttctccttccaaatctcct
tctcctcccaggaaaataaccaaggccaaagctacgccctctgcgtcgtctaaaaagccc
accaccacaccaatccgtcctggacccaagcccattgccaataaaggctctgaatccagc
tcattcctcaccgccgctgagcgcaagaagattcaagccaaagaggacaagcgcgaatct
gaacaatgcttcgactttcttgtcaacattcgagacaaggaaggaaaccgcccagatgac
cctgattatgacaagcgctcaattctcatcccgaagaagagctgggccgagtttacgccg
tttgagaagcagttttgggagatcaagcaaaatcattacgacactgtcctattcttccaa
aaaggcaaattctacgagttatacgaggatgacgccttgatcggtcaccaagagtttgat
ctcaaattgactgatagggtcaagatgaagatggtcggtgtccccgagcaatctcttgaa
ttttggatcgccaagttcctcggtgcaggtcacaaagttggaatcgtcgaccaagctgag
actgctattgggatggagatgcgaacaaaggctggtcaaaagactggaggaagagagatt
gtccgacgagagttggctagagtgttcactaacggaaccattgtcgacagtggttacttg
aactctgatgatcccaatcatttggtctctatcaaggaatcatctggtagcccggaaggc
atctcttcctttggtatctgtatcgccgatgcctcgactggtgaattctcaatctctttc
tttgaggatgatgtctgccgaactcggctcgaaacgatgttcaggcagattcgccccaag
gagctcattcatgccaagggcaacttgtctgtcacgaccacccgactccttcgaaatatc
ctcccctcttccaccgcctggcaatcgtttagggacggcaaggaattttacaccgctgaa
gatacactcagtctcctcccctccatcttttccaacgaacaaggtcaaattaccatccca
gaagccatcacctcgcttcaagataacgcccttgccatggaatctctcggcggaatgctt
ttctacctcaaatcgctcaaccttgacaaggacttgttctctcaacgcaactttaacatt
tacgatcccatcaaggagggtaaaaacctcatcttggacggcaagaccctcggtcacatg
gaagtgttggtaaacaatgaaggtggtatcgaaggcactctggccgaacttcttcagcgg
tgtgtttctccatcaggcaagaggttgttcaaagtttggttgaggtcaccgttgagagat
gcggatgctatcaacgccaggttggacgcggttgaggaccttatgaaccatccaaggttc
tctggtgatttcacccagctttgtaaaggacttcccgatcttgaacgtctaatctctcgt
attcacgccggctctgtcaagcaatctgactttcttcaagtcgtcgagtcattttcaaaa
ctccaaaaaggtattgacaacttgatcgacatgtctgaaagcttggagtctacgggagtc
aaggcgctgctgaggagtgcgccagacttgagtgggatgattcaacatattcgagggatg
tacactattgagcagaacgagaagacgattgctatccttcccaatccgggcgcggatgag
gaatgcgatgccgcggacgccgaggttgaacgtattgaggaagagttgaacgagattctt
gaagaagttaagaagactctaaagtgcaaggaagcagtattctggcatagtgctcaaggg
gggaaggagatcttccaaatccaagtcccggcaagcgtcaaggcccctgccaggtggaca
aaggctagtggtaccaagagtcacaacaggtattacacccccgagactatcccagtcatc
agacagattcaagaagctcgtgagacccaagcagctgccaagaaaaactttttcaagcac
ctcatggatgagtttagcaaggatcgtgagacatggcttatcaccgttcgagtgatcgcc
gagttggactgcctcgtctcccttgccaaagcgtcctccgatatggacgaacccaagtgt
cggcctacctttgtttcctcttcctctgcgtttatcgactttcgtgacctccgacaccca
tccatgtgcctccgctccgattttatttcaaacgacgttcagctcggtggagatcagcct
agacaggtgctgttaacaggtccgaatatggcgggtaaaagtacgctgttgagaatgact
gctgcaggagttatcatggcacagttgggatgttatgtgcccgctagtgaagcgagattg
agcccggtggataagattcagactagaatgggtgcctatgacaatatgtttgcgagtgcg
tcgacttttaaagttgagctggatgaatgttctcgcatcttgcgtgaagccggaccaaag
tctcttgtcatcctggacgagctgggtcggggaacctcaacctacgatggtatggccatt
gccggtgcagtgttacatcatattgctactcactccctccccttgggattcttcgctacc
cactatggatccctcaccgacgatttcgcgtaccatccgaatattcgtaggatgcacatg
caaacgcacgttgatgacgagcaaaagcaagttgtctttttgtacaagctcatccccggt
gtggcggagtcatcgcacggtacacacgttgcaaggatggctggtgtcccactagatgtc
gtccttcgtgccgaatcagtatcccaacagttcttttctgcattcaacgacaagctcgtc
aaccgtcgtcagtcaaagatgcctattgttgcccaagcagattttgcatggttgatgagg
gtcgtcaagggtttggaaggtgcggtagctggtagtcaggataagaagggcatactggga
gggcatgaggcgaccttggctgatcagctggatattgtcgagcgatgtgcggggggctat
gagattgctgaggcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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