KEGG   Cupriavidus necator N-1: CNE_1c11150
Entry
CNE_1c11150       CDS       T01564                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cnc  Cupriavidus necator N-1
Pathway
cnc03410  Base excision repair
cnc03430  Mismatch repair
cnc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cnc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CNE_1c11150 (recJ)
   03430 Mismatch repair
    CNE_1c11150 (recJ)
   03440 Homologous recombination
    CNE_1c11150 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnc03400]
    CNE_1c11150 (recJ)
DNA repair and recombination proteins [BR:cnc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     CNE_1c11150 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CNE_1c11150 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CNE_1c11150 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: AEI76471
UniProt: G0F0Z3
Position
1:complement(1142726..1144423)
AA seq 565 aa
MTRIAIRQFSPEHASSLAAAGLHPTLARILAARGVARAAELATDLPELVPPAAMKGIGHA
AAYLADAIAAGKRLLIVADYDCDGATACAVGVRGLRMLGARVEYIVPNRFEYGYGLTPEI
VALAARQQPDVIVTVDNGIASVDGVAAANALGIDVVVTDHHLPGSELPQAAVIVNPNQPG
CEFPSKNLAGVGVMFYVLLALRAELRQRGVYTQATQPPLQTLLDLVALGTVADVVKLDTN
NRILVAQGLRRMRAGRMQPGVAALFRAAGREAARANTFDLGFGLGPRLNAAGRLADMSLG
IECLLTEDANRAWEIAQELDGMNRERRDIEAGMQQEALQILEQPLAGPDPSARFTVSVFN
DTWHQGVIGIVASRLKDKFHRPTITFAPGDETTVKGSGRSIPGFHLRDALDLVSKRRPGM
LLKFGGHAMAAGLTVRAERFAEFQEAFEAVGREWLTDDQLARVIETDGDIEDQCFSPEFV
TLLEQQVWGQGFPAPTFCGEFDVLRQSVLKGKHLKLQLGRGSQRFDAIWFNHADSLGASA
QVAYRLDNNTFNGVTRVQLVIEHAQ
NT seq 1698 nt   +upstreamnt  +downstreamnt
atgacccggatcgccatccgccagttttcccccgaacacgccagctcgctggccgccgcc
ggcctccaccccacgctggcccgcatcctggccgcgcgcggcgtggcccgcgccgccgag
cttgccaccgacttgcccgaactggtgccgcccgcggccatgaagggcatcggccacgcc
gcggcctacctggctgacgccatcgccgccggcaagcgcctgctgatcgtcgccgactat
gactgcgacggcgccaccgcctgcgcggtgggcgtacgcgggctgcgcatgctgggcgca
cgggtggagtacatcgtgccgaaccgcttcgagtacggctacggcctgaccccggagatc
gtggcactggcggccaggcagcagccggacgtgatcgtcacggtcgacaacggcatcgcc
agcgtcgacggcgtggccgcggccaatgcgctgggcatcgacgtggtggtgaccgaccac
cacctgcctggatctgagctgccgcaggccgcggtgatcgtcaacccgaaccagccgggc
tgcgaattccccagcaagaacctggcgggcgtgggcgtgatgttctatgtgctgctcgcg
ttgcgcgcggaactgcgccagcgcggcgtctatacccaggccacgcaaccgccgctgcag
acgctgctggacctggtggcgctgggcacggtggccgacgtggtcaagctggacaccaac
aaccgcatcctggtggcgcagggcctgcgccgcatgcgcgccggacggatgcagccgggc
gtagcggcgctgttccgtgccgccgggcgcgaggcggcgcgcgccaataccttcgacctg
ggcttcgggctgggtccgcgcctgaacgcggccggccggctggcggacatgtcgctgggc
attgaatgcctgttgaccgaagatgccaaccgcgcctgggaaatcgcccaggagctggac
ggtatgaaccgcgagcggcgcgacatcgaggccggcatgcagcaggaggcgctgcagatc
ctggagcagccgctggccggcccggatccgtcggcacgctttaccgtcagcgtgttcaac
gacacctggcaccagggcgtgatcggcatcgtggcgtcgcgtctgaaagacaagttccac
cgccccaccatcaccttcgcccccggcgacgagaccaccgtcaagggctcgggccgctcg
atccccggcttccacctgcgcgatgcgctggacctggtgtccaagcgccgtcccggcatg
ctgctcaagttcggcggccacgccatggcggccgggctgaccgtgcgcgcagagcgcttt
gccgagttccaggaagccttcgaggcggtcggccgcgaatggctgaccgacgaccagctg
gcgcgcgtgatcgagaccgacggcgatatcgaggaccagtgcttcagcccggaattcgtc
accctgctggagcagcaggtatggggccagggcttcccggcgccgaccttctgcggcgag
ttcgacgtgctgcgccagagcgtgctcaagggcaagcacctgaagctgcagctggggcgc
ggcagccagcgctttgatgcgatctggttcaaccacgccgactcgctcggtgccagcgcg
caggtggcctaccggctcgacaacaacaccttcaacggcgtcacccgcgtgcaactggtg
atcgagcacgcgcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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