KEGG T00243: CND02690

Cryptococcus neoformans JEC21: CND02690

Entry

CND02690 CDS T00243

Definition

damaged DNA binding protein

Orthology

K07466

replication factor A1

Organism

cne Cryptococcus neoformans JEC21

Pathway

cne03030	DNA replication
cne03420	Nucleotide excision repair
cne03430	Mismatch repair
cne03440	Homologous recombination

Module

cne_M00288

RPA complex

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:cne03030]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cne03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cne03430]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cne03440]

SSDB

Motif

Pfam:

Rep_fac-A_C Rep-A_N tRNA_anti-codon BRCA-2_OB1 DUF4539 VirArc_Nuclease

Other DBs

NCBI-GI:

58266158

NCBI-GeneID:

3257214

UniProt:

Q5KIJ9

Position

4:join(732977..733116,733171..733311,733361..733633,733681..733783,733841..734099,734149..734171,734263..734804,734853..735063,735120..735221)

AA seq 597 aa
MASPLTVGFCERATSAEDVSECFDSVVQVLNVKKIASTDTTAVDRYRAILSDGQYFIQAM
LATQLNHFVESKQVDKHSLVKVVNFSVNSVSGRKLLIILALEVVPWTDEKIGNPVSVDQA
KSGASASAQPAGAHSAPLQSATAPAPARAQVPGRNASSARPGNTKPKGDLGPLYPIEGLS
PYQNRWTIKARVTQKSDIRHYSNQRGDGKLFNVTFMDETGEIRATGFNDAVDNFYNLLEV
GKVFFVSRARINIAKKQFSNVNNEYEIMFERDTEIEPCADESVPQVKYNFKGIGDLGELQ
KDDVCDVIGVVREFAKRELQLVDQSGQSVRLTLWGKQAETFQADDQPVIAFKGVKVGDFG
GRSLSMFSNATMTINPDIPEAHSLRGWFDAEGHNKHFTAYTTASVGDSAINTAAGAATRP
AELKTIAQVKDEQLGMSEKTDFFSTEATVAFIKKDPFSYPACANPDNCAKKVVEDGSGWW
CEKCQRRWDEPIHRYILSMNVMDYTGQFWMTAFNETAEQIMGISANDLMKLKNEGNDLDY
DVHFAKATARTYVFQMMAKQDSFNDQVRVRYQCRKVAPPDYVADSAHLSQMISQMSV

NT seq 1794 nt +upstreamnt +downstreamnt
atggcaagcccacttacagtcggattctgcgagcgagcaacgtccgcagaggatgtctca
gaatgctttgattctgtcgttcaggtcctcaacgtaaaaaagattgcttccactgacaca
actgctgtcgacagataccgagcaattttgtcggatggacagtactttattcaggcaatg
cttgctactcaattgaatcattttgtggagagcaagcaagttgacaaacattctcttgtc
aaggttgtaaacttttctgttaatagtgtttcaggccgaaaactattgattattctcgct
ctggaagttgttccttggacagacgaaaagattggaaaccctgtcagcgttgaccaagca
aagagtggcgcgtccgcctcagcccagcctgccggagcccattctgcccctcttcaatct
gctactgcacccgcgcctgcgcgagcccaggtacctggccggaatgcctcttctgctaga
ccagggaacacaaagcccaaaggcgacttgggaccactgtaccccatcgaaggattgagc
ccttatcagaatagatggaccatcaaagctcgggtaactcaaaagtctgacatccgacat
tattctaatcaaagaggggatggtaaacttttcaacgtgacttttatggatgaaactggg
gaaatcagagccaccggattcaacgatgctgtcgacaatttctacaaccttcttgaagtc
ggcaaggtgttttttgtgtcgcgtgctcggatcaacattgctaaaaagcagttcagcaac
gtcaacaatgagtatgagatcatgtttgagagggacacagagatcgagccttgtgcagac
gagtcagtgccgcaggtcaaatataacttcaaaggtattggagatcttggagaactacaa
aaggatgatgtctgtgatgttattggcgtggtgagggagtttgccaaacgagagctgcaa
cttgttgatcagtccggtcaaagcgtccgtcttaccctttggggtaagcaagctgaaaca
ttccaagcggatgatcagccagttattgctttcaagggcgtcaaagttggcgactttgga
ggtcgatcactttcgatgttcagcaacgccacaatgactattaatcctgatattcctgaa
gctcactctcttcgaggctggtttgatgccgaagggcataataagcacttcacggcgtac
actactgcgtctgtcggtgacagtgctatcaacactgctgcaggtgccgcgacgcgacct
gctgaactaaagacgatcgcacaagtaaaggatgagcagctcggtatgtcagagaagacc
gacttcttcagtaccgaagccactgtagcgtttatcaaaaaagatcccttttcttatcca
gcttgcgccaatcccgataattgtgcgaaaaaggtggtggaagatggtagtggttggtgg
tgtgaaaaatgtcaacgaaggtgggatgaacccattcatcgctacattctttcgatgaat
gtgatggattacacaggtcaattctggatgacggcattcaatgaaactgccgaacaaatc
atgggcatcagcgccaacgacttgatgaaactgaagaatgagggaaatgatctggattat
gatgttcattttgccaaagcgacagcaaggacgtatgtgttccagatgatggcaaaacag
gactctttcaatgatcaagtaagggtgcgatatcagtgccgaaaggttgcaccgcctgat
tacgttgccgactctgcccatttatcacagatgatcagccagatgagcgtataa

All links

Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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