KEGG T00243: CND05740

Cryptococcus neoformans JEC21: CND05740

Entry

CND05740 CDS T00243

Definition

hypothetical protein

Orthology

K03253

translation initiation factor 3 subunit B

Organism

cne Cryptococcus neoformans JEC21

Pathway

cne03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:cne03013]

SSDB

Motif

Pfam:

eIF2A RRM_1 RRM_5 WD40 RRM_6 DUF1669

Other DBs

NCBI-GI:

58266684

NCBI-GeneID:

3257438

UniProt:

P0CN44

Position

4:complement(join(1548360..1548755,1548806..1549224,1549279..1549432,1549485..1550165,1550231..1550377,1550430..1550616,1550673..1550858,1550929..1551020))

AA seq 753 aa
MSAADLDYFSEDEQREIEAELDTGFKDIEEKYAVTAQKGFETMLVVDNIPIVDGSKKQRL
LERLRQTFAKVGAPIEEESIDMPWNAAAGTNKGFVFLTYPDVKEAENAVHTLDGVSFGKN
VLHVNRFGDIQRFASMPVGEGDLPSGWKEKEYIEKDYLRNWLGDIAGRDQYVTFWETEVT
VWWNGRNGTAEALKGPDGKPVKNSKWGELYLQWSTMGTYLASLHRVGVALWSGPKLDGPI
GVNVLRFTHPNVRLIQFSPCENYLVTWSEDPLPNYENHPNAALRDTFGPEDEGNQYVIWD
IKTTRVLRTFPGDKSAIGVDDTQSRMSWPTFKWSADDSYIAKCNVGAGISVYELPTMGLL
DRKSIKIEGVQDFEWCPMSQKDLIARQEGKGKECVLAFWTPEAQNQPARVNIMAVPSRTI
LRSKNLFNVSECKFYWQSQGDFLCVKVDRHARKAKSKKATSCNLEIFRMREKDYPVEVLE
FKDYVPQFAWEPSGTRFAIVLQAETNLPSVSGASTKYSIDFYQLDSKKGDFIAIKHLDSK
MANTLVWSPKGRHIALATIGSSSKYDIEFWDLDFTIDERREAAELGANVTMLGTGEHYGI
TEIAWDPSGRYIATSASTWRQSPEPGFSIWDFKGQQLLHESRDRFKQFLWRPRPPTLLSK
DQIKKVRKELREYSRQFDEEDAAEENRGSAEKLAQRRREIGEWNAWRTRNNDRLAFEREN
RGKSKAKIDVKGQEARVEEWVEELIDETEELSM

NT seq 2262 nt +upstreamnt +downstreamnt
atgtccgccgccgacctagactatttttcagaagatgagcagcgtgagattgaagctgag
ctcgacactggcttcaaggacattgaggaaaagtatgctgtgaccgcccagaagggcttt
gagacgatgttggtcgtcgacaacattcctatcgtagacggtagtaagaagcagagactg
ttggagcgattgagacagacattcgccaaagtgggcgcgcccatcgaggaggaaagtata
gacatgccttggaacgcagcagctggtactaacaaaggtttcgttttcctgacatacccc
gatgtgaaggaagcggaaaatgccgtccacactctcgacggtgtatcctttggtaaaaac
gtgctgcacgtaaatcgatttggagacattcaacgcttcgccagtatgcctgttggagag
ggcgatctgccatcgggctggaaagaaaaggagtatattgagaaggattacttgcgaaat
tggcttggggatattgctgggagagaccagtatgtaaccttctgggaaacagaggttact
gtctggtggaacggacgcaatggaaccgccgaggcattaaaggggcccgacggtaaacct
gtgaagaacagtaaatggggtgagttgtacctacagtggtccaccatgggaacctacttg
gcttcgcttcatcgtgttggcgttgccctatggtccggtcccaaactcgatggacccatt
ggcgtcaatgtgctcagattcactcaccccaatgttcggcttatccaattttccccctgc
gagaattatctcgttacctggtcagaagatcctcttccaaattatgagaatcatcccaat
gcagctctgcgagacactttcggtcctgaagacgaaggaaaccagtatgtcatttgggac
atcaagacgacacgtgttcttcggacattccctggtgataaatctgcaattggggtagat
gatactcaatcccgcatgtcgtggccaaccttcaagtggtctgcggatgactcgtatatc
gctaagtgcaatgtcggcgcggggatttcagtgtatgaactgcccactatgggattgttg
gatagaaagagtatcaaaatcgagggggtacaagactttgaatggtgtcctatgagccag
aaggatttgatagcgagacaagaaggaaagggaaaggagtgtgttctagccttctggacc
cctgaagctcagaatcagcccgctagagtgaacataatggctgtaccaagccggacgatc
ttgagatcaaagaacctgtttaatgtctctgaatgtaaattctattggcagagtcaaggt
gatttcctttgtgtaaaggttgatcgccatgctcgaaaggccaaatccaaaaaggcaact
tcgtgcaatttagaaattttccgcatgcgcgagaaagattaccctgtggaggttcttgaa
tttaaagattacgttccgcaatttgcatgggagccttcgggcactcgctttgccatcgtt
ctccaagcagaaacaaatcttccatcggtctcaggggcgtcgaccaagtacagcatcgat
ttctatcagcttgattccaagaagggagatttcatcgcaattaaacatcttgacagcaaa
atggccaatactctcgtctggtcacccaagggtcgtcatatcgcattggccaccatagga
tcgtccagcaagtatgatatcgaattctgggaccttgacttcactatcgacgaaaggcga
gaggctgctgagcttggggctaacgtaactatgttgggcactggggaacattacggcatc
acagagattgcttgggatcctagtggacggtacattgcgacttctgcatctacatggcga
cagtcccctgagcctggcttttctatttgggatttcaaaggtcaacaacttctgcacgaa
tcacgggatcgtttcaagcagttcctttggcggcctcgtcctcctacgctgcttagtaag
gatcagattaagaaggtcagaaaggaacttcgagaatattcgcgacagtttgatgaagaa
gatgctgcggaggagaaccgagggagtgccgagaagctcgcccagcgtcgcagagagatc
ggcgagtggaatgcttggaggactaggaacaacgacaggctggcttttgaacgcgagaac
agaggcaagtcaaaggcaaagatcgatgttaaagggcaggaggcacgggttgaggagtgg
gtcgaagaacttatcgatgagactgaggaattgtcgatgtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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