KEGG   Cryptococcus neoformans var. neoformans JEC21: CNF04080
Entry
CNF04080          CDS       T00243                                 
Name
(RefSeq) DNA-directed RNA polymerase I polypeptide 2, putative
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CNF04080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNF04080
Enzymes [BR:cne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CNF04080
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     CNF04080
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2
Other DBs
NCBI-GeneID: 3258149
NCBI-ProteinID: XP_571380
UniProt: Q5KEV8
Position
6:join(1179337..1179637,1179690..1179775,1179826..1179957,1180012..1181077,1181132..1181706,1181761..1182566,1182623..1182851,1182918..1183236,1183313..1183326,1183388..1183441)
AA seq 1193 aa
MVAAFDPLAPSQASSSTSPDNTTFHTLTRERQFRHPPVNASDVPALDELVAPHIKSFNAL
IEDEGNPGAKGLLQMGVEDIGEKVVFDGKGSEGGLGTKLSYRIDRVALSKPLVPEKDKLA
VERRVFPTEARERLATYRSKLTVNIKWTVTDEDGNRKEFEEIKECGLLPVMVRSIRCNLQ
GLPATELIKHSEESTSFGGYFIVNGNEKIIRYLVVPRRHNPINLYRPSFAKRGASYTPYG
CQIRCVRPDETACTNTIHYLSNGGATLRFAWRKVEYMIPLMLILKALVDASDKEIFEGLI
QGEYDNTFLTDRVELLLRGQKSWGLHTGAQCLDYLGEKFRVVLNVPDDWSNVQVGGYLLR
KVVLVHLPAPRDKFRMLLFMLRKLYSQVSGATCPDNPDSPQHHEVLLPGFLYGMIIKERF
DDCLNAVKSQIQLDLRDGKARSFMDPKYFTSVLSKTNWDIGSKLSYFLATGNLVSPTGLD
LQQTSGFTIVAEKLNFYRYLSHFRCIHRGAFFAELKTTTVRKLMPESWGFLCPVHTPDGS
PCGLLNHLSHTCQIVTSSLDVSHIPALLSAQGMTQVFASSIDGRRMVCIQLDGKVIGYAS
PMKAKQLANRLRKLKTEADSKVPLDLEIGYVPVTKGGQYPGLYLFASRSRMMRPVTYLEN
GKLDHLGSFEQVYMDVAITKEEIEKGVSSHVELDPTSMLSVIANMTPFSDFNQSPRNMYQ
CQMGKQSMGTPSTAISKRTDNKMYRLQSGQTPVVRPDLHNQYGFDNFPNGTNAIVAVISY
TGYDMEDAMILNKSAHERGFGYGTVYKADIFDLKGVPGASRSAKPTLHFGLGRDVKEDHD
ARNIISQDGLPIIGTRVKAGDPLCAYIDDTTGRTKFHKYKGDETAFIDEVRVLGSDAGDA
ELQKIHIKLRIPRSPVIGDKFSSRHGQKGVCSQKFPAIDMPFSESGMQPDVIINPHAFPS
RMTIGMFVESMAGKAGALHGLAQDATPFKFSDKDRPVDYFGEQLRAAGYNYYGNEPMYSG
ITGEEFHADIYLGLVYYQRLRHMVNDKFQVRTTGPVDPLTRQPVKGRKRAGGIRFGEMER
DALIAHGTSFLLQDRLMNCSDYSTAWVCRNCGSLVSLGFEEVGGAQGMQEYCRICDGHKH
EHAEEMSKENGVGVVMRGGEKKGRMDVVPVPYVFRYLCAEMACMGIKLNVTVT
NT seq 3582 nt   +upstreamnt  +downstreamnt
atggtcgctgctttcgaccccctcgccccctcgcaggcatcctcgtccaccagcccggac
aacaccacgttccatactctcaccagagagaggcagttcagacatccgcccgtcaacgcc
tcagatgttcctgccctcgacgagctcgtcgctccccacatcaagagtttcaacgcattg
atagaagatgaagggaacccaggtgcaaagggtctgctgcagatgggcgtggaggacatc
ggagagaaggttgttttcgatggcaagggaagcgaaggcggtttgggcacaaaattgagc
taccgaatcgaccgggtcgcccttagtaagccccttgttcccgaaaaggacaagcttgcc
gttgagcgaagggtcttccctaccgaggcccgggagcgtcttgctacctaccgttcaaaa
ttgacagtcaacatcaagtggacagtcactgacgaggacggaaacaggaaggagtttgag
gagatcaaggagtgcggtttgttgcctgttatggttcgatcaataagatgtaaccttcaa
ggccttcctgccaccgaactcatcaaacacagcgaagagtctacctctttcggtggttac
tttatcgtcaacggtaatgagaagattatccgatatctcgttgttccccggcgacacaac
cctatcaatctctaccgaccttcattcgccaagcgtggtgcttcctacactccctacggc
tgtcagattcgatgtgtccgaccagacgaaaccgcttgtaccaacactattcattacttg
tccaacggtggtgctaccctgcgttttgcgtggcgtaaggtcgagtacatgattcctctt
atgctcatcctcaaggctctcgtcgatgcgagtgacaaggagatctttgagggtcttatc
cagggcgagtacgacaataccttcttgaccgaccgtgtggagttgttgttgcgaggccaa
aagtcgtggggtttacacactggtgctcaatgtttggactacttgggagaaaagtttagg
gttgtgctcaatgttcccgatgactggagtaacgtccaggttggtggctaccttttgcga
aaggttgtgctggtgcacttgcctgctcctagggacaagttcaggatgctccttttcatg
cttagaaagctttactctcaggtttctggtgccacttgccccgacaaccctgattctcct
cagcaccacgaagttctccttcctggtttcctctacggtatgattatcaaggagcgattt
gatgactgcctcaacgccgtcaagtcacaaatccaactcgacctgagagacggtaaggcg
agaagtttcatggatcccaagtactttaccagcgtactgtcaaaaacgaattgggatatc
ggttccaagctgtcatacttcctcgctaccggtaaccttgtctcacccaccggtcttgac
ttgcaacaaacatctggtttcaccattgtcgccgaaaaactcaacttttaccgatacctc
agtcactttaggtgtatacaccgaggtgctttctttgctgaattgaagacgaccactgtg
cgaaagttgatgcccgaatcgtggggtttcctgtgtcctgtacacacccccgacggttct
ccatgtggtcttttgaaccacttgtcgcacacctgtcaaatcgtcacttcatcccttgac
gtttcacacatccccgctctcctttcggcccaaggcatgacccaagtgttcgcctcttct
atcgacggtcgtcgcatggtttgcatccagcttgatggtaaagttatcggttacgcttcc
ccaatgaaggccaaacagctcgccaataggcttcgaaagctcaaaactgaggcagactcc
aaggtgcctcttgatctcgaaatcggttacgttcccgttacgaagggtggacagtacccc
ggcctttatctcttcgccagcaggagtcgaatgatgcgccctgtgacgtaccttgagaat
ggcaagcttgaccacttgggctcgtttgagcaggtgtacatggatgtggcgattaccaag
gaagagatcgaaaagggtgtctcctctcacgtggagctggatcctaccagcatgttgtca
gttattgccaacatgactcccttctctgactttaaccagagtccccgaaacatgtaccaa
tgccaaatgggtaaacagtcgatgggtactccttcaacagctatcagcaagcgtaccgac
aacaagatgtaccgactccagtctggtcagacacctgttgttcgtcccgatcttcacaac
caatacggtttcgataacttccccaacggtaccaacgccatagttgctgtcatttcttac
actggttatgatatggaagacgcgatgatcttgaacaagtctgcccacgagcgaggtttc
ggttacggtacagtctacaaggccgatatctttgacctaaagggtgtgcccggagcgagt
cgaagcgccaagcctactttgcactttggtctcggtagggatgtcaaggaggaccacgac
gcgaggaacattatcagtcaggacggtttgcccatcattggtaccagggtcaaggctggt
gatcctctgtgtgcctacattgacgacaccaccggtcgaaccaagttccacaagtacaag
ggtgacgaaaccgccttcatcgacgaagttcgtgtcctcggttccgatgctggtgatgcc
gagctccagaagatccacatcaaactccgtatcccccgttctcccgtcatcggtgacaag
ttctcttcccgacacggtcaaaaaggtgtatgttcccaaaagttccctgcgatcgatatg
ccttttagcgagagcggtatgcagccggatgttattatcaaccctcacgctttcccctcg
cgaatgactatcgggatgtttgtcgagagtatggctggtaaggcgggagctttgcacggt
cttgcccaggacgctactcctttcaagttctctgacaaggaccgacctgttgactacttt
ggcgagcagctccgagctgctggttacaattactacggtaacgagcccatgtactctggt
atcactggtgaagaattccatgcggacatctaccttggtcttgtctactaccagcgtttg
aggcacatggtgaacgacaagttccaggtcagaacgactggtccagttgatcctctgacc
agacaacctgtcaagggccgaaaacgtgctggtggtatccgattcggtgaaatggaacga
gatgctcttatcgcgcacggtacttccttcttgttgcaagaccgactcatgaactgttcc
gactactctaccgcttgggtctgcaggaactgtggttcactcgtatcgctcggtttcgaa
gaagtcggtggcgctcagggtatgcaggaatactgtaggatctgtgatgggcataagcat
gagcatgcggaggagatgagcaaagagaacggtgttggtgttgtcatgcgcggtggagag
aagaagggaaggatggatgttgtccctgttccttacgtcttccgatacctctgtgccgag
atggcttgtatgggcatcaagttgaatgtgactgtgacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system