KEGG T00243: CNK00930

Cryptococcus neoformans JEC21: CNK00930

Entry

CNK00930 CDS T00243

Definition

DNA ligase (ATP)

Orthology

K10777

DNA ligase 4 [EC:6.5.1.1]

Organism

cne Cryptococcus neoformans JEC21

Pathway

cne03450

Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:cne03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N BRCT PTCB-BRCT RNA_ligase

Other DBs

NCBI-GI:

58260492

NCBI-GeneID:

3254392

UniProt:

P0CN08

Position

11:complement(join(290985..291001,291054..291130,291182..291319,291369..291463,291519..291569,291622..291732,291787..292177,292236..292338,292397..292492,292579..292646,292806..292925,293009..293096,293154..293197,293253..293277,293325..293535,293610..293717,293771..293876,293937..294147,294275..294360,294416..294494,294548..294752,294801..294937,294991..295076,295135..295271,295327..295458,295518..295793))

AA seq 1065 aa
MAVHAPYNHAPPPTQEINGQKPTLAPAITLERPADCINRGQYPAFYIICGYLNRLRADAP
HKKYELLTRIFGNWREKVGPDLYPLIRLLLPDKDRERPVYNLKESMLARCYIDILSLEKH
SEAAQRLIKWKQPAGNSPNPTGDFAKVCYNEIKARSTVEEGQLSVEAVNMLLDKLAVGKM
KQKDYVPILKAINMQCTAEEQEWIIRIILKDLHISIRERGVLSAFHPDAIDLYNVCSDLK
RVCWTLYDPGFRLNKNETHLELFHSFLPQLCGRMNDASLENIAKAIGAPKEFIMEEKLDG
ERIQLHMRGNGAQWFYCSRKAKDYTYLYGAHPGEGSLTRYIATAFQDNVRNVILDGEMMV
WDPVVERYLAFGTLKSAALAFSLVKVFDILFLNDHCLSRKRLSERKRLLRSGKIFKNIEN
YKGRLEFVDEKRGKNAKDIREYLERVVETKGEGLVVKKTDVIYQTNSRGYDWIKVKPEYS
DQMGENLEVLVLGGWWGKGGRSGKISRLLCGLREQAFDDGTLQDFLFNRFWNELLGLRVD
FVSHLMHLRSMRCSPTHLSQCRNKHKKHWRPFDRSNPPPFMKLGPVGLDDKPDVYIEPEN
SFVIEVKASEIVPAGYGIGFTLRFPRCKYIYYDKNSRDYALDDECLWTVGQGFFYKTRKL
IKRTDFMDLFSRPKRSYDDSQGPGNFRGQKLSDADVETSIFSDMTFSDLEALVHKHGADF
TQAQLSDLSAIVISPDQKNPLVRAQIRHGVNVIKPEWVFESIARRTALPFLKEFLVFASE
EAQDGRYYNKTLEQYDKVSFVRDRTGGALVDEDGDADVEDEIMDGEDKDEIDVEESRESK
NRRMAREDLKEKESNRTLEQKKLQEAWGLRSRASPGDSDSEPEEEMSLKEESDTDSERSR
GLRAIYEDEEDGENDSHESDVGVNGDDYRAVPLSGLNDKEEGLMGESPEAMHYDEDRIFY
HLAFYIDTAKNAAVNGLESSSPSFDTQERLVKVEKLLIENGGRVARSISDPKLTHIIMDD
EDSRRYVELTRKTAMPKRKHIVTPKWVEDCVDEETLLDEDLYKPK

NT seq 3198 nt +upstreamnt +downstreamnt
atggcagtacacgctccatacaatcatgcacctccgcccactcaagaaataaatggtcag
aaaccgacattagcccccgcgataactctcgaacgtccagcggactgtatcaaccgcggc
cagtatcccgctttctacattatctgcggctatcttaacagactacgggcagatgcgccg
cacaaaaagtacgagcttctgacgaggatattcgggaactggagggagaaagtagggcca
gatctttatccgttgatcaggttgttgttacctgataaagatagggaaagacccgtgtat
aatttgaaagagtcaatgttggctcgatgctacattgatatattgtcgttagagaagcac
agcgaggcggctcagaggttgatcaaatggaagcagccggcaggaaattcaccaaatcca
actggagactttgcgaaagtctgttacaatgagataaaagctcgatccaccgtggaggaa
gggcaattgagtgttgaagcagtaaacatgctcctagataagctggctgttggaaaaatg
aagcaaaaagattacgtgccgatactcaaggcaatcaatatgcaatgtacagctgaggaa
caagaatggattatccggattatactcaaagacctgcatatctcaatacgtgaacgaggg
gtcttatcagcgtttcatccggatgcgatagatctgtataatgtttgttcagacctgaag
cgtgtctgttggactttgtatgatcccggcttcaggctcaataaaaatgaaacgcatctt
gaattattccactcctttctccctcaattatgtggccgcatgaatgatgcgtcgctcgaa
aatattgcgaaggctataggagcgccaaaagagttcatcatggaagaaaagttggacggg
gagagaatacagttacacatgagaggaaatggtgcacaatggttctactgttcaaggaaa
gctaaagactatacgtatctatatggcgcccacccaggagagggaagcttgacgcgctac
atagctactgcgttccaggacaatgtcagaaatgtcattcttgacggagagatgatggtt
tgggatcctgtagtggaacgttacctggcttttgggaccctcaagtcagctgcacttgct
ttttcattagtcaaggtgtttgacatccttttcttgaacgatcattgcctttcccgcaaa
cgtttatcagaacgcaagcgtctccttcgctctggaaaaatcttcaagaatattgagaac
tataaggggagattggaatttgtagacgagaaaagagggaagaacgcaaaggatattaga
gagtatttggaaagagtggtcgagaccaaaggcgaaggtttagtggttaagaagacggat
gtgatttatcagacgaactcgagaggatatgactggatcaaggtcaagcccgagtatagt
gaccaaatgggtgagaatttagaagtcttggtgttgggcggatggtggggtaaaggagga
cgttcagggaagatttcaagattactctgcgggttaagagaacaggcgtttgacgatggt
acacttcaagactttctgttcaatcggttctggaatgagctactcggactacgagtggat
tttgtaagtcacctcatgcacttgcgttcaatgaggtgctcacctactcacctatcacaa
tgcaggaataaacacaagaagcattggagaccttttgataggtccaacccaccccctttc
atgaagcttgggccagtgggtctcgatgacaagccggatgtttatatcgagccggaaaac
tctttcgtcatcgaagtaaaggcgtctgaaatcgtgccggcaggctatggaataggattt
actcttcgttttccacgctgtaaatacatttactacgacaagaatagtcgagactatgcg
ctcgatgatgaatgtctgtggacggtaggtcaaggatttttttataagactaggaaactc
ataaaacggacagacttcatggacctcttctcaaggcccaagaggtcgtatgacgatagt
caaggtcctggcaacttccgaggtcagaagctttcagatgcagatgtggaaacgagcata
ttcagcgatatgacgttttctgatctcgaagcacttgtgcataagcatggtgcagatttc
acgcaagcgcagctgtccgacctatcggcgattgttatctctcccgatcaaaagaaccct
ttagtacgagcccagatcagacacggagtcaatgtcatcaaacctgagtgggtatttgag
agtattgcgcggaggacagcattgcctttcttaaaggaattcctggtcttcgcatcggaa
gaagctcaagatgggcgatattacaataagacacttgagcaatacgataaggtttctttt
gtgcgcgatcgtaccggcggggcactcgtcgatgaagatggtgatgccgatgtcgaagat
gagatcatggatggtgaggacaaagatgagattgacgtggaagaaagtcgagaatccaag
aaccgaaggatggccagagaagatctcaaagagaaagaatcgaatagaacgctggagcag
aagaagcttcaggaagcatggggtttgagatcacgagcgagtccaggagattccgatagt
gaacctgaagaggagatgtcgctgaaggaggagagtgacacggattcggaaagaagtagg
gggctccgggcgatttatgaagatgaagaggacggagaaaacgacagtcatgaatcagat
gttggggtaaacggagatgattacagagcggttcccctcagcgggttgaatgacaaggag
gaaggacttatgggagagagtccagaagcaatgcactatgatgaagatcgaattttctat
caccttgcattttacatcgatactgcaaagaacgctgcggttaacggcttggaaagctcg
tctccctctttcgacacccaagaaagactcgtcaaagtcgagaagctgctgatagagaat
ggtggacgtgtggcgagaagcatctccgatcccaagctcacgcacattataatggatgat
gaggattcgagaagatacgtcgagttgacgaggaagactgccatgcccaaaaggaaacac
attgtgacccccaaatgggtggaggattgcgtggatgaagagacattgctggacgaagat
ctgtacaagcccaagtaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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