KEGG   Clostridium novyi: NT01CX_1627
Entry
NT01CX_1627       CDS       T00431                                 
Name
(GenBank) superfamily I DNA helicase (rep-like helicase)
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cno  Clostridium novyi
Pathway
cno03420  Nucleotide excision repair
cno03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NT01CX_1627
   03430 Mismatch repair
    NT01CX_1627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cno03400]
    NT01CX_1627
Enzymes [BR:cno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NT01CX_1627
DNA repair and recombination proteins [BR:cno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NT01CX_1627
   MMR (mismatch excision repair)
    Other MMR factors
     NT01CX_1627
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 Viral_helicase1 AAA_22
Other DBs
NCBI-ProteinID: ABK61254
UniProt: A0PZA6
Position
829402..831585
AA seq 727 aa
MVENSIRDKFFYLRDKIIENRYRELNEEQMKAVLSDENNLAVIACPGAGKTTTLIRRVDY
LVTFGPIYNTDYCPEEITNRDLNILEDYLNYNKTNTRLNYLLRQKAIDSNNIIIITFTRA
AAKNMKKKYKELGNHKGIPFFGTFHGLFYKILSRTEDKIEIINTSISYKLIKGVLSTYLD
EISDDKVKETLNSISYYKTFTDDKEKFNPNMDKDIFSECYRAYEDFKLRNNLMDFDDLQL
RCRDMFIKNLRTLNGYRKLFKYMLIDEFQDCDGIQIEILKLLNEDNSIFAVGDEDQCIYG
FRGSKPECMVNFHKYFKDGKKLFLSTNYRCPKSIVGASDYLIKNNKMRNDKNFKANKKDM
VEINVRSYKDEREQSDRIAMDITKLMSMGDYNYEDNAILYRTNVESRSLIDSFIRKKIPF
KLLDKEYNFFEHFICKDIIAYLKLSIDSSDKESFLRIINKPFRYISKINLAKVEKDNSGY
DCFDILKENEKIPPFQLKKIDEIKKDIQNLNRMSLSGAINSVLHTLDYYQYLKDYSMKFK
LDISELEEILEEFISASQDYTTIITFLAHISEVKDEIKNNKNNEEKNGVIFSTIHGVKGM
EFKNVFIINCNENNIPFGKEHEDIDIEEERRLFYVGVTRTIENLWICMSNEIKGKNKVAS
RFIKECNLKTVYDKLFEKDQIVIHKSFGKGKITNINDNIVEIEFENSIKRSFDKLVLYNN
GLVQKLV
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggttgaaaatagtataagagataagtttttttatttaagagataaaattattgaaaat
agatatagagaattaaatgaagaacaaatgaaggctgttttaagtgatgaaaataattta
gcagtaatagcatgtcctggtgctggaaaaacaacaactcttattagaagagtagattat
ttagttacatttggccctatttacaacacagattattgtccagaggaaatcacaaatagg
gatttaaatattttagaagattatcttaattataataaaacaaatacaaggttgaactac
ttattaagacaaaaggcaatagattctaataatataataatcataacttttacaagagct
gctgcaaaaaacatgaaaaagaaatataaagagcttggaaatcacaagggcatcccattt
ttcggaacatttcatggattgttctataaaattctaagtagaacagaagacaaaatagaa
ataataaatacatcaatatcttataagttaataaagggagtactttctacttatttagat
gaaataagtgatgataaggtaaaagaaacattaaattcaatatcttattacaaaactttt
actgatgataaagaaaagtttaaccccaacatggacaaagatatattttcagaatgttac
agggcctatgaagattttaaacttagaaataatcttatggattttgatgatcttcaatta
aggtgtagagatatgtttattaaaaatctaagaacacttaatgggtataggaaattattt
aaatatatgttaatagatgagtttcaagattgtgatggtatccaaattgaaatattaaaa
cttttaaatgaggataattcaatatttgcagtgggagatgaggatcagtgtatatatgga
tttagagggtcaaaacctgaatgtatggttaactttcataagtattttaaagatggaaag
aagttatttttatctacaaactatagatgtcctaaaagcatagttggagcatcagattat
cttataaaaaataataaaatgaggaatgataaaaattttaaagctaataaaaaagatatg
gtagaaataaatgttagaagttataaagatgaaagagaacaatcggacagaatagctatg
gatattacaaaattaatgtctatgggagattataactacgaggataatgctattttatat
aggactaatgtggagagtagaagcttaattgattcatttattagaaagaaaatacctttt
aaattattagataaagaatacaatttttttgaacattttatatgcaaggatataatagcc
tatttaaaacttagtattgattcatcagataaagaaagttttcttagaattataaataag
ccttttagatacataagtaaaattaatttggcaaaggttgaaaaagataattctggttat
gattgttttgatattttaaaggaaaatgagaaaattcctccttttcaattaaagaaaata
gatgaaataaagaaagatattcaaaatttaaatagaatgtctttatcaggagctataaat
tcagtattacatacattagattattatcagtatttaaaggattatagtatgaaatttaaa
ttagatataagtgaattagaagagattctagaagagtttatatcagcatcacaggattat
actactataattacttttcttgcacatattagtgaagtaaaagatgaaataaaaaataat
aaaaataatgaagaaaaaaatggagttatatttagcactattcatggcgtaaaaggaatg
gaatttaaaaatgtatttattataaattgtaatgaaaataatattccttttggaaaagaa
catgaggatatagatatagaggaagaaagacgacttttttatgtaggggtaaccagaacc
atagaaaatttatggatatgtatgagcaatgaaattaagggaaaaaataaagtagcatca
agatttataaaagaatgtaaccttaaaactgtttatgataagttatttgaaaaagatcaa
atagtaatccacaaaagttttggaaaaggtaagataactaatataaatgacaacatagtt
gaaatagaatttgaaaatagcataaaaagaagttttgataaattagttctatataataat
ggccttgtacaaaaactagtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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