KEGG   Clostridium novyi: NT01CX_1677
Entry
NT01CX_1677       CDS       T00431                                 
Name
(GenBank) DNA polymerase I, polA
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cno  Clostridium novyi
Pathway
cno03030  DNA replication
cno03410  Base excision repair
cno03420  Nucleotide excision repair
cno03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NT01CX_1677
   03410 Base excision repair
    NT01CX_1677
   03420 Nucleotide excision repair
    NT01CX_1677
   03440 Homologous recombination
    NT01CX_1677
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cno03032]
    NT01CX_1677
   03400 DNA repair and recombination proteins [BR:cno03400]
    NT01CX_1677
Enzymes [BR:cno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NT01CX_1677
DNA replication proteins [BR:cno03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NT01CX_1677
DNA repair and recombination proteins [BR:cno03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NT01CX_1677
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NT01CX_1677
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 XPG_N HHH_2
Other DBs
NCBI-ProteinID: ABK62148
UniProt: A0PZF5
Position
882127..884763
AA seq 878 aa
MNKERLLILDGHSLMYRAFFALPPLTNKEGIHTNAIYGFIKMLLKMKEEIKPDYIVTTFD
KKAPTFRHKEYEEYKAGRAKMPDELNEQFPIVKDILNKLAINIFEIEGFEADDLIGTLSK
FAEEKGIEVYIVTGDRDALQLATDNVRVVINKKGMSEKEIYDKNKMIEEYGVTPTEFIDV
KGLMGDKSDNIPGVPGIGNKTALKLIKEYGSIENVLENVENISGKKMKQNLIDYREQAIL
SKKLATICKDVPIEINLDEIKSKEDYDIQGVRLLFQSLGFKSLLDNIGDNEGLDKEDEAE
VKESDINIKSTNINTIENFSKFVEGIDDSIYIQADFVDENIYSKIEFNNLYVRHKEEVFV
ISANEIKDKDGAKYFEILKNLFENEKIKKVCHDSKKVYVVLKKHNIAAKNIAFDTKIAAY
LLQPSKSDYMLKDLIEEMLLLSLKDDDNIKINETYYIKDVYEKLEKDIKKSNMEELLYTV
ELPLIEVLASMECEGFRVDENRLTEIGEKFKKEIETLEKEIHELADEEFNIKSPKQLGKI
LFEKLDLPVIKKTKTGYSTNAEVLEKLKDSHPIIEKIIEYRQITKLDSTYVEGLKNVIDE
DAKIHSSFNQTVTTTGRLSSTEPNLQNIPIKHEMGREIRKVFVPNNDESVIFSADYSQIE
LRILSHIADDEKLIDAFKHHKDIHTITASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGA
FSLSKDINVSRKEAKEYIDTYFSRYPNVKKYIDEIISKAEVDGFVTTILNRKRYIPEIQS
RNKIVRGFGERLAMNTPIQGSAADIIKLAMVEVYNELKNRNLKSTLILQVHDELILNVYK
DELEEVKEMVVDKMENVMKLLVPLEADVNVGETWYEAK
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgaataaagaaagattattaatacttgatggacatagtcttatgtacagagcgttcttc
gcattaccaccactaactaataaagagggaatacatactaatgctatctatggatttata
aaaatgcttcttaaaatgaaagaagaaataaaaccagattacatagtaactacctttgat
aaaaaagctcctacttttagacataaagagtatgaagagtataaggcaggaagagctaaa
atgcctgatgaacttaacgagcaattcccaatagttaaggacatattaaacaaacttgct
ataaacatatttgaaattgaaggatttgaagcagatgatttaataggcaccttatctaag
tttgcagaagagaaaggtattgaagtttacattgtaactggagatcgtgatgcgcttcaa
cttgcaactgataatgtccgtgttgttataaacaaaaaaggaatgagcgaaaaagaaata
tacgacaaaaataagatgatagaagaatatggagttactccaactgagtttatagatgta
aaaggacttatgggagataaatcggataatataccgggagttccgggaataggaaacaaa
actgcattaaaacttataaaagaatatggaagtatagaaaatgttctagaaaatgtagaa
aacataagtggtaaaaaaatgaaacaaaatcttatagactatagagaacaagctattctt
agtaaaaaactggccactatatgcaaggatgtacctatagaaattaatttagacgaaata
aaatcaaaagaagattacgatatacaaggtgttagactgttattccagagcttaggtttt
aaatctttattagacaatataggtgataatgaaggtttagataaagaagatgaagcagag
gtaaaggaatctgatataaatataaaatctacaaatataaatacaatagagaatttttca
aaatttgtagagggtatagatgatagtatttatattcaagctgattttgtagatgaaaat
atttattcaaaaatagaatttaataatttatatgtaagacacaaagaagaagttttcgta
ataagtgcaaatgaaataaaagataaagatggagcaaaatattttgaaattttaaaaaat
ctttttgaaaacgaaaaaataaaaaaagtatgtcacgatagtaagaaagtttatgttgtt
ctaaagaaacacaatattgctgcaaaaaatatagcttttgatactaaaatagcagcctac
ttacttcaaccatcaaaatcagattatatgttaaaggatttaatagaagaaatgctttta
ttaagtttaaaagatgatgataacataaagataaatgaaacttattatataaaagacgtc
tatgaaaagttagaaaaagacataaaaaaatcaaatatggaagaactattatatacagta
gagttacctttaattgaagttttagcctctatggaatgtgaaggatttagggtagatgaa
aatagattaactgaaataggtgaaaaatttaaaaaagaaatagaaactttagaaaaagaa
attcatgaacttgcagatgaagaatttaatataaaatcaccaaaacaactaggaaaaata
ttatttgaaaagttagatcttccagtaattaaaaagacaaagacaggatactcaactaat
gcagaggttcttgaaaagcttaaagatagtcaccctataattgaaaaaataatagagtac
agacaaataacaaagcttgattctacttatgttgaaggacttaaaaatgtaattgatgaa
gacgcaaagatacattctagtttcaatcaaacagttacaactacaggaaggctttcaagt
acagaacctaatcttcaaaatatacctataaagcatgaaatgggtagagagataagaaag
gtatttgtacctaataatgatgaatcagttatattctcagcggactattctcaaatagaa
ttaagaattttatcacatattgcagatgatgagaaattaattgatgcttttaaacaccac
aaagatattcacactataacagcgtcagaagtgtttaaagttccaattgatgaggtaaca
ccacttatgagaagcaacgcaaaggcagttaattttggaatagtttatggaattggtgct
tttagtttatcaaaggacataaacgtatctagaaaagaagctaaagaatatatagatact
tattttagtagatatcctaatgtaaaaaaatatatagatgaaattataagcaaggcagag
gtagatggttttgtaacaactatattaaatagaaaaagatacataccagaaatacaatca
agaaataaaatagtaagaggatttggagaaagacttgctatgaacactccaatacaagga
agtgcggctgacataatcaaacttgctatggttgaggtttacaatgaattaaaaaataga
aatttaaaaagtacattaatattacaagtacatgacgaacttatactaaatgtttacaaa
gatgaattagaagaagttaaagaaatggtagtagataaaatggaaaatgtaatgaaactt
ttagttcctcttgaagcagatgtgaatgttggagagacatggtacgaagcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system