KEGG   Cedecea neteri SSMD04: JT31_11965
Entry
JT31_11965        CDS       T03298                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
cnt  Cedecea neteri SSMD04
Pathway
cnt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cnt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    JT31_11965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnt03400]
    JT31_11965
Enzymes [BR:cnt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JT31_11965
DNA repair and recombination proteins [BR:cnt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JT31_11965
SSDB
Motif
Pfam: PriA-like_WH PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR AAA_30 zinc-ribbons_6 TrwB_AAD_bind AAA_19 AAA_22
Other DBs
NCBI-ProteinID: AIR05292
UniProt: A0A089PY30
Position
2536538..2538736
AA seq 732 aa
MPVAHVALPVPLARTFDYLLPDGMQVSAGCRVQVPFGKQREAVGIVMAVSDNSDLPLEKL
KPVADVLDGRSLFTPSLWRVLLWAAEYYHHPIGEVLFHALPILLRQGKPAHHAPLWYWFV
TEEGKAIDLNSIKRAPKQQQALAALRHNIIWRHQISELEISEPGLQALRTKGLCDLKSAA
PAEQDWRPGYSVAGERLRLNTEQATAVGAIHSESDHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLKARSGEAAIV
IGTRSSLFTPFCRLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHAENIPIILGSATPA
LETLHNVEVGKYRQLRLTKRAGNARPAHQQVVDLKGQQLKAGLAPALIKKIGEHLAADNQ
VILFLNRRGFAPALLCHECGWIAECARCDHYYTLHQGQRHLRCHHCDSQRAIPQQCPQCG
STHLVPVGMGTEQLEHSLEPLFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRAAERFAQLYVQVSGRAGRAGKQGEVLLQTHH
PEHPLLQTLLAKGYDAFSSQALSERKTVFLPPYTSHVLIRAEDQNNHQAPLFLQQLRNLL
EASPLRDEQLWIMGPVPSLQPKRGGRFRWQILLQHPSRARLQKLVSHSLTLVNTLPEARK
VKWMLDVDPIDG
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgcccgtagcccacgtcgctctgcctgttccgctggcccgtaccttcgactacctgctt
cccgacggcatgcaggtaagcgctggctgccgcgtgcaggtgcccttcggcaaacagcga
gaggccgtcggcatcgtcatggcggtcagcgataacagcgatctgcctcttgaaaaactg
aaacccgttgccgatgtgctcgacggacgatcgctcttcacgccgtcactgtggcgcgtc
ctgctgtgggcggcagagtattatcaccatccgattggtgaagtactctttcacgctctg
ccgattcttctgcgccagggaaaacccgcgcaccatgccccgctttggtattggtttgtc
actgaagaaggcaaagccatcgatctgaacagcattaaacgagcgcctaagcagcaacag
gcgctggccgcgttacgccacaatattatctggcggcatcaaattagcgagctggagatc
agcgaaccggggctgcaggcgctgagaaccaagggcctgtgcgacctgaaaagcgcagca
cccgcggaacaagactggcggccaggctattccgttgccggtgaacgactaaggctgaat
accgagcaggccaccgccgtgggggccatccacagcgaatctgaccacttcgccgcctgg
ctgctcgccggtattaccggctccgggaaaaccgaggtttacctcagcgtgctggaaaac
gtcctggcgcaggggaaacaggctttagtgttagtgccagaaattggcctgacgccgcaa
accatcgctcgtttccgtgagcgctttaacgcgccggttgaagtcctgcattccgggctg
aacgacagcgaaagacttagcgtctggctaaaagcgcgtagcggtgaggctgccatcgtc
attggcacgcgctcttctctgtttacgccattctgccgtctcggggtcattgttatcgat
gaagagcatgacagctcctataagcagcaggaaggctggcgctatcacgctcgtgacctg
gccgtttaccgggcacatgcagaaaacattccgattattctcgggtcggccacgccagcg
ctggaaacgctgcacaatgttgaggtggggaaataccggcagctgcgcctgaccaaacgt
gcaggaaatgcgcgccctgcccaccagcaggtcgtagatctcaaagggcagcagcttaaa
gcaggcctggcgccagcgctgatcaaaaagataggcgagcatctcgccgcagataaccag
gtgattctgttcctcaaccgccgtggctttgcgcctgccctgctctgccacgaatgcggc
tggattgcagaatgcgcccgctgcgatcactattacacgctgcaccagggccagcgccac
ctgcgttgccaccactgcgacagccagcgtgcaatcccacagcagtgcccgcagtgcggc
tccacgcatctggtcccggttggcatgggcaccgaacagcttgagcatagtcttgagccg
ctattccctgacgtgccgatttcccgtatcgatcgcgacaccaccagccgtaaaggggcc
ctggaacagcagttggccgaagttcaccgcggcggcgcacgtattcttatcggcacccag
atgctggctaaaggccaccacttcccggacgtcacgctggtcgcactgctggacgtagac
ggcgcgctattttctgccgatttccgggccgccgagcgttttgctcagctctacgttcag
gtttctggccgtgccgggcgagccggtaagcagggtgaagtcctgctgcaaacgcaccat
ccggaacatcctttactgcaaacgctgctggccaaaggctatgacgcgttttccagccag
gcgctaagcgagcgtaaaacggtctttttaccgccgtacaccagccatgtactgattcgc
gccgaggatcagaacaaccatcaggcgccgctgtttttacagcagttgcgtaatctgctg
gaagccagcccgctgcgcgatgagcagctctggatcatggggcctgtcccgtcgctgcag
ccaaaacgcggcggccgcttccgctggcaaatcttgctgcagcatccgtccagggcacgc
ctgcaaaagctggtcagccattcgctcacgctggtcaacacgctgcccgaagcccgtaaa
gtgaagtggatgctggacgttgaccctatcgacgggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (48)   

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