KEGG   Cedecea neteri SSMD04: JT31_16340
Entry
JT31_16340        CDS       T03298                                 
Name
(GenBank) RNA pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cnt  Cedecea neteri SSMD04
Pathway
cnt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cnt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JT31_16340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnt03019]
    JT31_16340
Messenger RNA biogenesis [BR:cnt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     JT31_16340
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: AIR06128
UniProt: A0A089U7B5
Position
3459197..3459727
AA seq 176 aa
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGL
QRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLLSSDGEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMPLQEVTPPRNNSPAWRRKRG
NT seq 531 nt   +upstreamnt  +downstreamnt
gtgatcgatgatgatggctaccgccccaacgttgggatcgtaatatgtaatcggcaggga
caggtgatgtgggcgcggcgttttggccaacattcctggcaatttcctcaggggggcatt
aatcctggcgagtccgctgaacaggcaatgtaccgggagcttttcgaagaagtcggtttg
cagagaaaagacgttcgcattcttgcctcgacccgaaactggttgcgttacaaattacct
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccaaaaacaaaaatggttt
cttttgcagctgctgagcagcgacggtgagatcaatatgcaaaccagcagcacgccggaa
tttgatggctggcgctgggtcagttattggtatccggttcgtcaggttgtttcatttaag
cgcgacgtttaccgccgcgtaatgaaagagtttgccagcgtggttatgccactgcaggaa
gttacaccaccacgcaataactcgccggcctggcgacgtaaaagaggttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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