KEGG T00961: Coch

Capnocytophaga ochracea: Coch_0016

Entry

Coch_0016 CDS T00961

Definition

Exo-alpha-sialidase (EC:3.2.1.18)

Orthology

K01186

sialidase-1 [EC:3.2.1.18]

Organism

coc Capnocytophaga ochracea

Pathway

coc00511	Other glycan degradation
coc00600	Sphingolipid metabolism

Class

Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:coc00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:coc00511]

SSDB

Motif

Pfam:

BNR_2 BNR_3 BNR_assoc_N BNR

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(17265..18812)

AA seq 515 aa
MKQLFTIIALCFLSFGYAQKGMTFTQTQMPLATDKDNLITSFVLPIKQGTEVKELSLQFK
SKKLNLSELSVYVGANAKREQATLFAKTSNLGCNTKLQGNFKATNDTLFVWISARTTQKP
DLLQKLYLSKVKLITNEAKITLSNAKKEGQRFAIALRQRKQDGIECYRIPGLVTTNKGTL
IAVYDNRYNNCKDLQEDIDVGMSRSTDGGQTWEPMKKVIDMGEWGGKTNRLNGVGDPAVL
VDEQTNTIWVMGLWQHGLDPQTMSWWGSKSGMTPEETGQIVVVKSEDDGKTWSEPINITS
QIKNPEWRLFFQGPGRGISMSNGTLVFAGQFKDKDQVPHSTIIYSKDHGKTWHVGTGAKT
HTTESQVVELSDGTLMLNMRDDRNRSNYELSDNYHGRSVAVTADMGKTWVEHNTSRTALT
EPNCMASIISYKDKKGKQYLFFSNPNDAKDRVNMTIKTSKDEGNTWDKLASVLLYEQAAM
GYSCLTVIDNKYIGILYEGDGDLYFQKVPIKEFIK

NT seq 1548 nt +upstreamnt +downstreamnt
atgaaacaactatttaccattattgcattatgttttcttagctttggctatgcccaaaaa
ggaatgacttttactcaaacacaaatgcctttggctactgataaagataatcttattacc
tcatttgtactacctataaagcaaggaacagaggtaaaagaactttctttgcagtttaag
agtaaaaagctcaatctttcagaactctctgtttatgtaggtgctaacgctaaaagagaa
caagcaacactttttgctaaaacttcaaatcttggttgcaacaccaaactacaaggaaat
ttcaaagctactaatgataccctttttgtttggatttctgctcgtactactcaaaaacca
gacctcttgcaaaaactgtacttatcaaaggtaaaactcatcactaatgaggcaaaaatc
accctcagcaatgctaaaaaagaaggacaacgttttgctattgcgcttcgtcagcgtaaa
caagacgggatagaatgttaccgtataccagggcttgtaaccactaataagggtacgctg
atagccgtttacgacaatcgttacaacaactgcaaggatttgcaagaagatatcgatgta
ggaatgagtcgcagtactgatggcggacaaacgtgggaacctatgaaaaaagtgattgat
atgggggaatggggaggaaaaactaaccgccttaatggggtaggagatcctgcagttttg
gtagacgagcaaaccaatactatttgggtgatgggcttgtggcagcacggcttagatcct
caaacaatgagttggtggggctctaaaagtggaatgactcctgaggaaacaggacaaata
gtagtagtaaaaagtgaagatgatggtaaaacgtggagtgaacctatcaatatcacctct
caaatcaaaaatcccgaatggaggctctttttccaaggacctggaagaggtatctctatg
agcaatggtactttggtatttgcaggtcagtttaaagataaagatcaagtgcctcattca
actattatttacagtaaagaccacggaaaaacgtggcacgtaggtacaggagctaaaaca
cacacaactgaatctcaagtggtagaactctctgatggtacgttaatgctcaatatgcgc
gacgaccgcaatcgatctaattatgagctttctgataactatcacgggcgttcagtagct
gttactgccgatatgggcaaaacgtgggtagagcacaatacctctcgcactgctcttacc
gaacctaattgtatggcaagcattatttcttataaagataaaaagggaaaacagtattta
ttcttctctaatcctaatgatgcaaaggatagagtaaatatgactatcaaaacaagtaaa
gacgaaggtaatacttgggataaacttgcttcagtattgttgtatgagcaagcagctatg
ggctattcttgtcttacagtaatagataataaatatataggtattctttacgaaggtgat
ggagatttatacttccaaaaagtgcctatcaaagagtttatcaagtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-COC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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