KEGG   Capnocytophaga sp. oral taxon 323: AM608_03970
Entry
AM608_03970       CDS       T04076                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
col  Capnocytophaga sp. oral taxon 323
Pathway
col03030  DNA replication
col03430  Mismatch repair
col03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:col00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AM608_03970
   03430 Mismatch repair
    AM608_03970
   03440 Homologous recombination
    AM608_03970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:col03032]
    AM608_03970
   03400 DNA repair and recombination proteins [BR:col03400]
    AM608_03970
Enzymes [BR:col01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AM608_03970
DNA replication proteins [BR:col03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AM608_03970
DNA repair and recombination proteins [BR:col03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AM608_03970
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 DNA_pol_A_exo1 Rv2179c-like GIY-YIG NDUS4
Other DBs
NCBI-ProteinID: ALC96858
UniProt: A0A0M4H1K8
Position
900875..902203
AA seq 442 aa
MYAILDIETTGGKYNEEGITDIAIYQFNGHEITDQFISLINPERPIQEFVTKLTGINNKM
LRNAPKFYEVAKRIVEITTDCIIVGHNAAFDYRILQTEFRRLGYDFVRTTLCTVELSERL
IPNKESYSLGKLVRSLGIPVSDRHRASGDALATLKLFKYLLEKDTKKDIITTSVKQDIRL
EMASRHLKILDTLPETLGIFYMHNEEGKVIYIGKHKNIKQQVNRLFTSPSKRDRYLQRHT
YRVTYQETGNELIAALKRLEEIHLNLPKCNRRNPEKEINITYALTSHFNTKGYLYFSIEL
LSTQNEIITTFETKEQAQHFLNQITEEYHLNEVDFNNETVEEYNSRASEVLSKYGLVHRN
VAIVDKGRVIGEKSIILVVDGNIQGYAFFNLNFQLTQLEMLQNLITPLPNSLTNRHLLHA
YLRRKPKVKVLNLSEQKPYHNE
NT seq 1329 nt   +upstreamnt  +downstreamnt
ttgtacgcaatactcgacatagaaaccacaggaggtaaatacaatgaagagggcattacc
gatatcgccatctatcagttcaacgggcacgaaataaccgaccagttcatatcattgata
aaccccgaacgccccattcaagagttcgtcactaaacttacaggcatcaacaacaaaatg
ttgcgcaatgctcctaaattctatgaggttgccaaacgcattgtcgaaattaccaccgat
tgcattatcgtaggtcataatgccgccttcgattatcgcatcttgcaaactgaatttcgt
cgcttaggatacgactttgtccgtacaaccctctgcaccgtagaactctccgagcgactc
attcccaataaagaatcatatagtttaggtaagttagtgcgctccttaggtattcctgta
agcgaccggcatcgcgcttctggtgatgccttggctactctaaaactctttaaataccta
ctcgaaaaggacaccaaaaaggatatcattactacctctgtcaagcaagatattcgttta
gaaatggcttctcgtcatctaaaaatactcgacactctccctgaaacattagggattttt
tatatgcataacgaagaaggtaaggtcatttacatcgggaaacacaaaaatatcaaacaa
caagtaaacaggctcttcacttctccgtccaaacgcgatagatacttgcaacgccatact
tatcgagttacttatcaagaaacaggcaatgaactcatcgctgctttaaaaaggttagaa
gaaatacacctcaacctcccaaaatgcaataggcgaaatcctgaaaaagaaataaatatc
acttatgcacttacttctcactttaatactaagggatatctttatttttcaatagaatta
ttatccactcaaaacgaaattatcactacttttgaaaccaaagaacaagcccagcacttt
ttaaatcaaatcactgaagagtaccatttaaacgaagtagatttcaataacgaaaccgtt
gaggagtataactcgcgcgcctctgaggtgctttcaaaatacggacttgtgcaccgaaac
gtagctattgtagataaaggtagagtaataggcgagaaaagcattattttagtagtcgat
ggcaatattcaaggctatgccttctttaatctgaatttccagcttactcaattagagatg
ttacaaaacctcatcactcctttacccaattcattaacaaaccgtcaccttttgcacgct
tacttgcgacgaaaacccaaagtaaaagtgctaaatctaagcgaacaaaaaccttatcat
aatgaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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