KEGG   Colwellia sp. PAMC 21821: A3Q33_07660
Entry
A3Q33_07660       CDS       T04816                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
colw  Colwellia sp. PAMC 21821
Brite
KEGG Orthology (KO) [BR:colw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:colw03400]
    A3Q33_07660
Enzymes [BR:colw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A3Q33_07660
DNA repair and recombination proteins [BR:colw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    A3Q33_07660
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_30 AAA_12 AAA_11 DEAD SDE2_2C
Other DBs
NCBI-ProteinID: ARD44199
Position
complement(1816474..1818492)
AA seq 672 aa
MKLNPGQNEAKKYVEGPCLVLAGAGSGKTGVICQKIAYLIQNCGYKAKNIAAVTFTNKAA
REMKERVVKMMDKSQTRGLTVCTFHSLGLDIIRRELKTLGYKPGFTLFDDQDSLALLKEL
TQEQLDGDKDLISKLQMMISNWKNELLLPDAAIKQASDADALQYAEFYAMYQKHMKAYNA
LDFDDLILIPTLLMRNYPEVRTRWQQKIKYMLVDEYQDTNASQYELVKQITGEQGLLTVV
GDDDQSIYSWRGAKPQNLVLLGEDYPNLKLIKLEQNYRSSGRILKCANTLIANNPHVYDK
ALFSELNYGVELRVLQTKNEDHEVERVVGELIGHRFLNKSKFKDYAILYRGNHQSRLLEK
ALMTNRIPYKINGGTSFFSRAEIKDMMAFLRVLVNPDDDNAFLRIVNVPRREIGPTTLEK
LGSYANMRQISMFAASFELGLEQHLTGRGLISVQRFTRWLVETADHAERGETSAVLRSMV
REINYEDWLYDTSPSAKAAEMRMKNVTQLFSWVTQMLEGEDDEEPMTLAQVVTRLTLRDM
MERNEDEEDTDQVQLMTLHASKGLEFPYVFLIGMEEGLLPHQTSMDEGNVEEERRLAYVG
ITRAQRELIFTYARERRQFGEVSRTEASRFLHELPQDDLSWELTQTKQSIEKKQETAKMG
VANLREMLKHKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaaattaaacccaggtcagaatgaagcaaaaaaatatgttgaaggtccatgcttagta
ttagcgggagcgggcagtggaaaaactggggttatttgtcagaaaattgcgtacttaatt
caaaattgtgggtataaagcgaagaatatcgctgcggtaacctttaccaataaagcggca
cgtgaaatgaaagagcgtgtagttaaaatgatggataagtcgcaaacaagggggttaacg
gtatgtacgtttcactctttgggtttagacattattcgccgagaattaaaaactttaggc
tataaacccggctttaccctatttgatgaccaagacagcttagcgttattgaaagagctc
acccaagagcagcttgatggtgataaagacttaatcagcaagctgcaaatgatgatttca
aattggaagaatgaattgttactgcccgatgccgccattaaacaagccagtgatgcagat
gccctgcaatatgctgagttttatgccatgtatcaaaagcatatgaaggcctacaacgcg
ctagatttcgatgacttaattttaattccaacgctattaatgcgcaattatccagaagtg
cgtacgcgctggcagcaaaaaatcaagtatatgctggttgatgaataccaagacacaaat
gctagccaatatgaattagtgaagcaaataaccggcgagcaaggtttattaacggttgtg
ggtgacgatgaccaatcaatatactcatggcgtggtgctaaaccgcaaaatttagtgtta
ttaggtgaagactaccctaatcttaagttgattaaacttgagcaaaactatcgctctagc
gggcgtattctaaagtgtgccaataccttaattgccaataacccgcatgtttatgataaa
gcgttgttcagcgagcttaattacggtgttgaattacgtgtattgcaaactaagaatgaa
gatcatgaggtagagcgagtggtcggtgaattaattggacatcgctttttaaacaaaagt
aaattcaaagattacgcaattttgtatcgtggtaatcatcaatcacgtttgcttgaaaaa
gcgttaatgaccaacagaataccttataaaattaatggcggtacctcgtttttctcgcgc
gctgaaataaaagatatgatggcgtttttacgcgtgttggtgaaccctgatgatgacaac
gcttttttgcgtattgtgaacgtaccacgacgagaaattggtccaacaacgctagaaaaa
ttgggcagttatgccaatatgcgacaaattagtatgtttgcagccagtttcgagttaggg
ctagagcaacacttaacgggtcgcggattgatcagtgtgcaacggtttacacgttggttg
gtagagacagctgatcatgccgagcgcggtgaaacatcagctgtattacgctcaatggtg
cgcgaaataaactacgaagattggctgtacgacacttcaccgagcgcaaaggcggcagaa
atgcgtatgaagaacgtcacacaattgtttagttgggtcacacagatgctcgaaggtgaa
gacgatgaagagccaatgactttggcgcaagtggttacacgacttaccttacgcgacatg
atggagcgaaatgaagatgaagaagatactgatcaagtacaattaatgacactgcatgcc
tctaaaggtctcgagtttccttatgtatttttaattggcatggaagaaggtttattgccg
catcaaaccagtatggatgaggggaatgtagaggaagagcgccgtttagcttatgtaggt
attacccgtgcacaacgagagttaatctttacttatgcaagagagcgcagacagtttggt
gaagtgtctcgcactgaagcgagtcgatttttacatgagctaccacaagatgatttaagc
tgggaactgacacaaaccaaacagagcatagagaaaaagcaagaaacagccaagatggga
gtcgcaaatttacgtgagatgctaaagcataagaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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