KEGG   Colwellia sp. MT41: CMT41_04485
Entry
CMT41_04485       CDS       T04159                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
com  Colwellia sp. MT41
Pathway
com03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:com00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CMT41_04485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:com03019]
    CMT41_04485
Enzymes [BR:com01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CMT41_04485
Messenger RNA biogenesis [BR:com03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CMT41_04485
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 P-loop_SecA AAA_22
Other DBs
NCBI-ProteinID: ALO34064
UniProt: A0A0S2JDY0
Position
1053086..1054519
AA seq 477 aa
MLKRLLMSDTPTTKFTDLGLSEPLLKAVRDKGYETPSPIQAQAIPAVLSGRDIMAVAQTG
TGKTAGFTLPLLQRLSSNKGNKVASNNVRALILTPTRELAAQIHESIETYGKYLHLHSMV
VFGGVKINPQMMRLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIR
DIKKLIAVLPKDRQNLLFSATFSPEIRALAKGLVNNPLEISVDAENSTADKVTQWLMAVD
KKRKPAVLTYLIQENNWQQVLVFTKTKHGANKLTKHLEAEGITAAAIHGNKSQGARTKAL
AAFKDGSVKVLVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSL
VCADELDLLWGIEHVIQQHIERKVIEKFIPANELGESRAIKPLRTGRPPKSKPSQHSARG
RGRVEHKDGQRSGGNANGHNTSGNKAKPANNSSRRKKPEYDGTGPKPRTPRRAANNS
NT seq 1434 nt   +upstreamnt  +downstreamnt
attttaaagagattacttatgagcgataccccgacaactaaatttactgatttaggttta
tctgagccattactaaaagcagtacgtgataagggttatgaaacaccatctcctattcaa
gcgcaagctattccagcggttctttctggacgagatattatggcagtagcgcaaacgggc
accggtaaaacggcaggttttactttaccgttattacagcgcctttctagtaacaaaggc
aataaggttgcgtcaaacaacgtaagagcattaatacttaccccaacacgtgaactagcg
gcgcaaatccacgaaagtatagagacctatggtaagtatttacatttacactcaatggtc
gtttttggtggcgtgaaaattaatccgcaaatgatgcgccttcgccaaggtgttgatgta
ctggtggcaacgccaggacgtttactcgatttatacaatcaaagagcggtaaaatttagt
caacttgaagtgtttattcttgatgaagccgatcgcatgttagatatgggctttattcgc
gatattaaaaagcttatcgcagtgctaccaaaggaccgtcaaaacttacttttttcagca
accttctctcctgagatccgtgcgcttgctaaaggtctggttaataacccattagagatt
tcggtagatgctgaaaatagcaccgcagacaaagttacccaatggttaatggccgttgat
aaaaaacgtaagccagcagtacttacatatttaatacaagaaaataactggcaacaagtg
ttggttttcactaaaaccaaacatggcgctaataagctaaccaagcacctcgaagcagaa
ggcataactgcagcggctatccatggtaataaaagccaaggagcacgtactaaagcactt
gctgcctttaaagatggctcagtcaaggtactagtggcaaccgatattgctgctcgtggt
attgatattgatttattaccgcaagtggttaactttgatttaccgaatgtgccagaggat
tatgtgcatcgtattggccgtacagcccgtgccggtaatactggccaagcattgtcatta
gtttgtgccgatgagttagacttattgtggggcattgaacatgttattcagcagcatatt
gagcgtaaagttattgagaagtttatacctgccaatgagctgggcgaatcacgtgcgata
aaacctttaagaacaggtaggccgccaaagtctaaaccaagtcaacattcagcacgtggt
agaggtcgagttgaacataaagatggtcaacgctcaggtggtaatgctaatggtcacaat
accagtggcaataaagcaaaacctgcgaacaactcctctagacgtaaaaagccggaatac
gacggtactgggcctaagccacgtaccccaagacgtgcagcaaataatagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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