KEGG   Colwellia sp. MT41: CMT41_10795
Entry
CMT41_10795       CDS       T04159                                 
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
com  Colwellia sp. MT41
Pathway
com03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:com00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CMT41_10795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:com03400]
    CMT41_10795
Enzymes [BR:com01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CMT41_10795
DNA repair and recombination proteins [BR:com03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CMT41_10795
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CMT41_10795
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CMT41_10795
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ALO35153
UniProt: A0A0S2JGL7
Position
2530548..2531993
AA seq 481 aa
MNNTEQPSILWHDYETWGISPKFDKPSQFAGIRTDLELNIIGKPEMFYCQPPVDYLPHPE
ACLITGITPQKAQREGLTEAEFAARIHELFSAPNTCVAGYNNIRFDDEVTRYLFYRNFYD
PYAREWQNGNSRWDIIDMVRATYALRPEGINWPTVDRDGEEVVSFRLELLTKANGISHES
AHDAMSDVYATIAMAKLIKEKQPKLYEFIFNLKNKNHVKDLINTADMTPIVHTSSKISSA
HGCTSWFAPIIYHPVNKNAVICVDLAQDITPLLTLSSEEIKARLYTRHDELAPDEKPIPV
KLIHVNKCPMIAPAKTLLPENAERLAIPRDFCLENLALLKKHAELRDKLSDVFASSDFDN
TDVDAEQALYGGKFFSHSDKAQMDILRGLTPEQLANHPFEFQDERLGVLLFRYRARNFPL
TLSTSEQQKWQDYCQNKMQYGGKGILSLDEFMMKIENLAHEHEKDKAKMSVLKALYEYVQ
G
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaacaacaccgaacagccctcaattctttggcacgattatgaaacctggggtatatcg
ccaaagtttgataagccttctcaatttgccggcattcgtaccgatctcgagttaaacatt
attggcaagccagaaatgttttattgtcaaccgccggttgattacctgccacacccggaa
gcttgtttaattaccggtataacgccgcaaaaagcacaacgtgaagggctaaccgaagca
gaatttgctgcgcgcatacatgaattattttcagcgcctaatacttgtgtcgctggctat
aacaatattcgctttgatgatgaagttactcgctatttattttaccgtaacttttacgac
ccttatgcgcgtgaatggcaaaatggcaatagccgctgggatattatcgatatggtgcgg
gccacttatgccctacgccctgaaggtattaactggccaaccgttgatcgcgacggcgaa
gaagttgttagttttcgcttagagttattaaccaaagccaatggtattagtcatgagtct
gcccatgacgccatgagtgatgtttacgccactattgctatggcaaagttgatcaaagaa
aaacagccgaaactctatgagtttatttttaacttaaaaaataaaaatcacgttaaagat
ttgatcaataccgcagacatgacccccattgtccatacctcaagtaaaatatcctcggca
cacggttgtaccagttggtttgcaccgataatttatcatcccgttaataaaaatgcggtt
atttgtgtcgatttggcccaagatattacacctttattaacacttagcagtgaagaaata
aaagcgcgtttatatacccgtcatgatgagttagcgccggacgaaaagcctattccggtt
aaacttattcatgtaaataaatgtccgatgatcgcacctgcaaaaaccctattacctgaa
aatgccgagcgtttggccataccaagggatttttgtttagaaaatttagcgttattaaaa
aagcatgctgaactgagagataagctcagtgatgtttttgccagctctgattttgataat
actgacgtagatgccgagcaagcattatatggcggtaagttctttagccatagcgataaa
gcgcaaatggatattttgcgcggtttaacgccagagcaattagctaaccatccgtttgaa
tttcaagatgagcgtttaggcgtgttgttatttcgttatcgagcgagaaacttcccactc
actttatctacaagtgagcaacaaaaatggcaggattactgccaaaataaaatgcaatac
ggtggtaaaggtattttgtcactggatgaatttatgatgaagattgaaaatttagcgcac
gagcatgaaaaagataaagctaagatgtcggtactcaaagcattatatgaatatgtacaa
ggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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