KEGG   Actibacterium sp. EMB200-NS6: TQ29_01690
Entry
TQ29_01690        CDS       T04096                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
con  Actibacterium sp. EMB200-NS6
Pathway
con03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:con00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TQ29_01690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:con03021]
    TQ29_01690
   03400 DNA repair and recombination proteins [BR:con03400]
    TQ29_01690
Enzymes [BR:con01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TQ29_01690
Transcription machinery [BR:con03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TQ29_01690
DNA repair and recombination proteins [BR:con03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TQ29_01690
SSDB
Motif
Pfam: RNA_pol_Rpb6 RXLR
Other DBs
NCBI-ProteinID: ALG89114
Position
348092..348445
AA seq 117 aa
MARVTVEDCVDKVPNRFELVMLAAHRAREITSGSALTVDRDNDKNPVVALREIAEETQSA
DALRERMIESNQTQIEVDEPEEDSMALLMGGEADKPADDDMSEEKLLRALMDAQGQR
NT seq 354 nt   +upstreamnt  +downstreamnt
atggcccgcgtgacggtcgaagattgcgttgacaaggttccgaaccggtttgagctggtg
atgcttgctgcccaccgggcgcgagagatcacgtctggcagcgccctgaccgtggaccgg
gacaacgacaagaacccggtggtcgccctgcgcgagatcgccgaagaaacccagtctgcc
gacgctctgcgtgaacgcatgatcgaaagcaaccagacccagatcgaagtggacgaaccc
gaagaggattcgatggcacttttgatgggtggcgaggctgacaaacccgccgatgacgat
atgtctgaagaaaagctgctgcgcgcattgatggacgcgcagggccaaaggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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