KEGG   Actibacterium sp. EMB200-NS6: TQ29_18595
Entry
TQ29_18595        CDS       T04096                                 
Name
(GenBank) type IV secretion system protein B4
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
con  Actibacterium sp. EMB200-NS6
Pathway
con03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:con00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TQ29_18595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:con02044]
    TQ29_18595
Enzymes [BR:con01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     TQ29_18595
Secretion system [BR:con02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   TQ29_18595
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_10 TrwB_AAD_bind ATPase AAA_16 CbiA DUF87 nSTAND3 FtsK_SpoIIIE Zot SIP1 SbcC_Walker_B AAA_29 ABC_tran
Other DBs
NCBI-ProteinID: ALG92219
Position
pNS6001:175368..177731
AA seq 787 aa
MPRDAALDARTMTPDWYARETRLAHMLPYVSLVDDQTVRTRVNELFRCIRLEGINSYTTD
DAYLDKVTALFARIIAQLGPEFSYYVHKVSKAIKPDLDPIREDSFAGEVDRRWRAKLETS
GLRDKTLTLTVIHRPPPKSLLPFLSRSAPDRLKEETRKRLQRLGEAVNVFLSGLTELKPR
LLSAGSGELVGFLGALNTGTELPLYPANTYGFLSFNVANTRVTFNGDHFELSEGVVGHRY
GKSFTIGEYSEGTSCTMFDMLNLPVDMIVTHSFTPINSNLMAGRIKRQKRQMQASQDAAL
SLMEALDIAADDLEAKRQSFGEHHMVVTLFCDTLEELQTLSAEIVNAAATEGVKMIGERV
AAKAHYLSQHPGNQPKRVRASAVTNRNFADFAAFHRTQLGKPAALTPWGQVVTYLPTPEQ
SAYRFSYHEQGSPDKEPTSGHTLIMGRPGSGKSVLSAFLMTQARRAGARVFVFDYRLGME
MAVRANGGRYASLNAGQPTGLNPLWTETDARGTAWLSDWLTTLLYRADKPLTPAQTNRIQ
EVVRQNAQASNPALRNWRDFASLFVSTDDGGDLHQRLLEWTEDGRYGWIFGQSLEDTFSL
KGDVVGFDLTGILDSEADKERMAVLSYLFRRVEREIEDRRPTIIVIDEAWKALDNAYFAE
RLSNWLVTARKQNTVAVMMTQYASQLERTRTGKTIIEAVPTQILLPNIRAQPADYAMLNL
TEKELDVLLNTGSNSRLALIRDDQGSIVVDADLSALGPNLTILGGMEKGEALVGADYRDR
PDFWRLS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgccccgtgatgctgcgctcgatgcccgcacaatgacgccggactggtatgcgcgcgag
acccggcttgcgcatatgctgccctatgtgagcctcgtcgacgaccagaccgtgcgcacc
cgggtcaacgagctctttcggtgcattcggctcgaggggatcaacagctacacaaccgac
gatgcctatctcgacaaggtgacagcgctttttgcccgcatcatcgcgcagcttgggccg
gaattcagctattacgtccacaaggtctccaaggccatcaaacctgatctcgaccccatc
cgtgaggacagcttcgcgggcgaggtggaccggcgctggcgcgcgaaactcgagaccagc
gggctccgcgacaaaacactgacgctcaccgtcattcaccgcccgcctccgaaaagcctc
ctgccgttcctcagccgcagcgcgccggaccgactgaaggaggagacccgcaaacgcctg
cagcgcctcggtgaggccgtgaacgtcttcctctcggggcttaccgagctcaagccgcgc
ctgctgtcagccggatcgggagagttggtgggatttttgggcgcgctcaacacgggcacc
gagctgccgctctacccggccaacacctacggctttttgtccttcaacgtcgccaatacc
cgcgtgacgtttaacggcgaccatttcgagctttccgaaggcgtcgtggggcatcgctac
ggcaagagtttcaccatcggggagtactcggaaggcacctcctgcaccatgttcgacatg
ctgaacctgccggtcgacatgatcgtgacgcactcctttacgccaatcaattccaacctc
atggcaggccggatcaaacgacaaaagcgccagatgcaagccagccaggacgcggccctc
tcgctcatggaagccctcgacatcgccgccgatgacctcgaggccaagcgccagagcttt
ggcgaacaccacatggtcgtgacgctcttttgcgacacgctcgaagagctgcaaacgctc
agcgccgagatcgtgaacgccgccgcgaccgaaggcgtaaagatgatcggcgagcgggtc
gcggccaaggcgcattacctcagccagcatcccggcaaccagcccaagcgcgtccgcgcc
agcgccgtcaccaaccgcaacttcgcggattttgcggccttccaccggacacagctcggc
aaacctgcagcacttaccccctggggccaggtcgtgacatatttgcccacgccggagcag
agcgcctaccggttttcctatcacgagcaaggctcgcccgacaaagaaccgaccagcggc
cataccctgatcatgggacgacccgggtcgggcaaatcggtgctgtccgccttcctgatg
acccaagcccgtcgagcaggggcgcgggtcttcgtcttcgactaccgtctcggtatggag
atggcggtccgcgccaatggcgggcgctacgcctccctgaacgccggtcagcccacgggc
ctcaatccgctctggaccgagaccgatgcgcgcggcaccgcctggctctcggattggctc
accacactgctctaccgcgccgacaagcccctcacaccggcacagaccaatcgcatccag
gaagtggtgcgccagaatgcccaggcctccaatccggccctgcggaactggcgggatttc
gcatcgctttttgtgtccaccgacgatggcggcgatctgcaccagcgcctgctcgaatgg
accgaggacggccgctatggctggatcttcgggcagagcctcgaggacacgttctcgctc
aagggcgatgtggtgggcttcgatctgaccggcattctcgacagcgaggccgacaaggaa
cggatggcggtcctgtcctatctcttccgccgggtcgagcgcgaaatcgaggaccgccgc
cccaccatcatcgtgatcgacgaggcctggaaggccctcgataacgcgtatttcgccgag
cggctgtcgaactggctggtgacagcgcgcaaacagaacacggtcgcggtgatgatgacg
caatacgcaagccagctcgagcgcacccggaccggcaagaccatcatcgaggcggtgccg
acgcagatcctgctccccaatatccgcgcgcagccagcggactacgccatgctgaacctc
acggagaaggagctcgatgtccttctcaacacgggcagcaacagccgcttggcgctgatc
cgcgacgatcagggctcgatcgtcgtcgatgccgatctgagcgcgcttggacccaatctc
accatccttggcggcatggaaaagggcgaagcgcttgtcggcgccgattaccgcgaccgc
cctgatttctggaggctttcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (40)   

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