KEGG   Corynebacterium pseudotuberculosis 42/02-A: Cp4202_0320
Entry
Cp4202_0320       CDS       T02053                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
cos  Corynebacterium pseudotuberculosis 42/02-A
Pathway
cos03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Cp4202_0320 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cos03021]
    Cp4202_0320 (rpoC)
   03400 DNA repair and recombination proteins [BR:cos03400]
    Cp4202_0320 (rpoC)
Enzymes [BR:cos01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Cp4202_0320 (rpoC)
Transcription machinery [BR:cos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Cp4202_0320 (rpoC)
DNA repair and recombination proteins [BR:cos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Cp4202_0320 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AEP69591
Position
342740..346840
AA seq 1366 aa
MAAKAAKQAEFKASSFFETIPWENRGKGSYVIDVNFFDELRIGLATADDIRRWSKGEVKK
PETINYRTLKPEKDGLFCERIFGPTRDWECACGKYKRVRYKGIICERCGVEVTKSKVRRE
RMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLERIIYFAANIITGVDEEARHSDQTT
LEAEMLLEKKDVEADAESEIAERAQKLEEDLAELEAAGAKADARNKVQKAADKEMQHIRE
RAEREIDRLEEIWQTFIKLAPKQMIIDETIYEELVDRYEDYFTGGMGAEAIQTLIRNFDL
DAEAEELREIINNGKGQKKMRALKRLKVVAAFQRSGNDPAGMVLDCIPVIPPELRPMVQL
DGGRFATSDLNDLYRRVINRNNRLKRMIDLGAPEIIVNNEKRMLQESVDALFDNGRRGRP
VTGPGNRPLKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHECGLPKLMALE
LFKPFVMKRLVENDYAQNIKSAKRMVERQRPEVWDVLEEAISEHPVMLNRAPTLHRLGIQ
AFEPKLVEGKAIQLHPLACEAFNADFDGDQMAVHLPLSAEAQAEARILMLASNNILSPAS
GKPLAMPRLDMVTGLYYLTMDKTEGEIGGQGAYQPATEDGPATGVYSSYAEALMARDRGV
LGLQAKIRVRISHLRPPVEVEAEQFPEGWEQGQTWLADTTLGRIMFNELLPWNYPYLEGV
MVRKGGGSNKILLGDVINDLAATYPMITVAQTMDKMKDAGFYWATRSGVTITMSDVLVLP
NKEEILDRYEAEAAKIERKYWEQGALTERERYDRLVELWKEATDEVGNAVEKLYPDDNPI
PMIVKSGAAGNMRQIWTLAGMKGMVVNSKGDYITRPIKTSFREGLSVLEYFNNSHGSRKG
LADTALRTADSGYLTRRLVDVAQDVIVREDDCGTKQGIRVPVAVEVKDAQGNVTGYTGHS
LIETSVAGRVASVDIKDSEGNVLVPAGENLTDQLIEKLIAAGVAEVKVRSVLTCQTPTGV
CAKCYGKSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVGGDITGGLPRVQEL
FEARVPKNRAPIASVAGTVHLEDEGNFYTLTINPDDGSDVVVYEKLSKRQGLATVRVPME
SNPGAMIERTLSEGDHVNVGDRLLRGPADPHDVLEVLGRRGVEQHLVDEVQDVYRAQGVA
IHDKHIEIIIRQMLRRGTVIESGATEFLPGTLVDLSEAKAANAEAIAAGGHPAELRSEIM
GITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENVIIGKLIPAGTGISRYR
NISVKPTEAARNAAYSIPTYGDSIYGDDSYGEFTGASVPLDEAYDL
NT seq 4101 nt   +upstreamnt  +downstreamnt
atggcagctaaagctgctaagcaggcggaatttaaagcatcatcattttttgaaacgatc
ccctgggagaaccgggggaaagggagttacgtgatcgacgtcaacttcttcgacgagctc
cgcatcggcctggctactgccgacgacattcgtcgttggtccaaaggcgaggtcaaaaag
ccggagaccatcaactaccgcaccctgaagccggagaaggacggcctcttctgcgagcga
attttcggcccaacccgcgactgggagtgcgcttgcggtaagtacaagcgtgtccgttac
aagggcatcatctgtgagcgctgtggcgttgaggtgaccaagtccaaggttcgccgtgaa
cgcatgggccacatcgaactggctgcgcccgtcacccacatttggtacttcaagggtgtc
ccgtctcgtctcggttaccttttggacctggctccaaaggatctcgagcgcatcatttac
ttcgcagccaacatcatcactggtgttgacgaggaagctcgccacagcgaccagaccact
cttgaggcagaaatgcttttggagaagaaagacgttgaggctgacgcagagtctgagatc
gcagagcgcgctcagaagctggaagaggaccttgccgagctggaagccgcaggcgctaag
gccgatgcccgcaacaaggtgcaaaaggctgcagataaagagatgcagcacatccgcgag
cgggctgagcgcgagatcgatcgtcttgaggagatctggcagacctttatcaagcttgct
cctaagcagatgatcattgatgagaccatctatgaagagctcgtggatcgttacgaggat
tacttcaccggtggtatgggcgcggaggccatccaaacccttatccgcaactttgacctc
gatgctgaggcagaggaactgcgcgagatcatcaacaatggcaaaggccagaagaagatg
cgtgccctcaagcgactcaaggttgttgctgcattccagcgctcgggcaatgacccagct
ggtatggtgctcgactgcatcccggtgatcccaccggagctgcgtccgatggttcagctc
gatggtggccgttttgctacctccgacctgaacgatctctaccgtcgcgtgattaaccgc
aacaaccgcctcaagcgcatgatcgacctcggtgctcccgagatcatcgtgaacaacgag
aagcgtatgttgcaggagtccgtcgacgcgctctttgataatggtcgccgtggtcgtccg
gtcaccggtcctggcaaccgtccgctgaagtccttgagcgatttgcttaagggcaagcag
ggtcgtttccgtcagaacttgctgggtaagcgtgtcgactactctggtcgttccgttatt
atcgtcggtccacagctgaagctgcatgagtgcggtcttccaaagctcatggctcttgag
ctcttcaagccgtttgttatgaagcgccttgtggaaaacgattacgcgcagaacatcaag
tcggctaagcgcatggttgagcgtcagcgccctgaggtgtgggacgttctagaagaggca
atttctgagcatcctgtgatgcttaaccgtgcacctaccctgcaccgcctaggcatccag
gccttcgagcctaagctcgttgagggtaaagctatccagctgcacccactcgcgtgtgag
gccttcaacgctgacttcgacggtgaccagatggctgtgcacttgccgctatctgctgaa
gcacaggccgaggcgcgcatcctcatgcttgcctccaacaacattctctccccggcatcc
ggtaagccacttgccatgccgcgtctggacatggtgactggtctttattacctcaccatg
gacaagactgagggtgaaattggtggtcagggtgcataccagcctgctactgaggatggt
ccagcaacgggtgtgtactcctcctacgctgaggcacttatggctcgcgaccgtggcgtt
cttggcctgcaggccaagatccgggtacgcattagccatctgcgtccgccggtagaggtt
gaggcagagcagttcccagagggttgggagcagggacaaacctggttggctgataccact
cttggccgcatcatgttcaacgagctcttgccgtggaactacccgtaccttgagggcgtt
atggtccgtaagggtggaggatcgaacaagattctcttgggcgacgtgattaatgatctc
gctgcgacctatccaatgattactgttgctcagacgatggacaagatgaaggacgccggt
ttctactgggcaacccgaagcggcgtgaccatcactatgtctgacgtgctcgttcttcct
aataaggaagaaattcttgaccgctatgaggccgaggctgcaaagatcgagcggaagtac
tgggagcagggtgctctgacagagcgcgagcgctacgaccgtctggtcgagctttggaag
gaggctaccgacgaggtcggtaatgccgtcgagaagctctatccggatgacaacccgatt
cctatgatcgtgaagtccggtgctgccggtaacatgcgtcagatctggacgctggctggc
atgaagggcatggttgtgaactcaaagggtgattacatcacccgaccgattaagacctcc
ttccgtgaaggcctgtcggttcttgagtacttcaacaactctcacggttcgcgtaagggc
ctcgccgataccgctctgcgtaccgccgactcgggttacctcactcgtcgtctggtggac
gttgcgcaggatgttatcgtccgcgaggatgactgcggcaccaagcagggcattcgtgtc
ccagtggccgttgaggttaaggatgctcagggcaacgtcaccggttacaccggacacagc
ctcatcgagacctctgttgctggccgcgtggcttccgttgacatcaaggattccgagggc
aacgttctggtaccagctggtgaaaacctcaccgatcagctcatcgagaagctcatcgcc
gcaggcgttgccgaggtcaaggttcgctccgtgcttacctgccagaccccgaccggtgtg
tgcgctaagtgctatggcaagtccatggctaccggcaagctcgttgatatcggagaggca
gtgggcatcgtcgctgctcagtccattggtgagcccggtacccagctgacaatgcgtacg
ttccaccagggtggcgtcggtggtgacatcaccggtggtcttcctcgtgtccaggagctc
ttcgaggctcgtgttcctaagaatcgcgctccgattgcttctgtggcaggtaccgtacac
cttgaggatgaaggtaacttctacaccctcaccatcaacccagacgatgggtcagatgtt
gtggtctacgagaagctctccaagcgtcagggtcttgctaccgtgcgggttcctatggaa
tccaacccgggcgccatgatcgagcgcaccttgtcagaaggcgaccacgtgaacgtgggc
gaccgtctgctacgcggacctgctgatccgcacgacgtgcttgaggttcttggccgccgt
ggtgttgagcagcacctcgtggacgaggttcaggacgtgtaccgcgcacagggtgtggct
atccacgataagcacatcgagatcatcattcgtcagatgctgcgccgcggcaccgtcatc
gagtccggcgcgacagagttccttccgggtactctcgttgacctttcggaggccaaggcc
gctaacgctgaggctattgctgctggtggacatcccgctgagctccgttcggagatcatg
ggtatcaccaaggcgtcgttggctaccgagtcgtggctgtccgctgcgtccttccaggag
accacacgcgtgcttaccgacgccgccattaacaagcggtccgataagctgatcggcctc
aaggagaacgtgatcatcggtaagctgatcccggcgggtaccggtatttcccgttaccgc
aacatctccgtcaaaccgactgaggcagctcgcaatgcggcttactcaatcccaacgtat
ggagattccatctatggcgatgacagctacggtgaattcaccggcgcttccgtgccactg
gatgaggcctacgatctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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