KEGG T01347: Calow

Caldicellulosiruptor owensensis: Calow_2223

Entry

Calow_2223 CDS T01347

Definition

helicase, recd/traa family (EC:3.1.11.5)

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

cow Caldicellulosiruptor owensensis

Pathway

cow03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:cow03440]

SSDB

Motif

Pfam:

AAA_30 HHH_4 UvrD_C_2 AAA_19 AAA_11 Viral_helicase1 Helicase_RecD PIF1 HHH_5 AAA_22 PhoH T2SE DUF2075 DEAD AAA_12 UvrD-helicase Arch_ATPase AAA HHH_2 DUF853 UvrD_C NTPase_1 AAA_29 AAA_16 HHH_3 AAA_25 ABC_ATPase AAA_28 ArgK ABC_tran DUF258 AAA_23 Mg_chelatase MobB

Other DBs

NCBI-GI:

312136188

NCBI-GeneID:

9961656

UniProt:

E4Q746

Position

complement(2387987..2390212)

AA seq 741 aa
MQQNIQGMVSDIIYRNLENSYTVFEIICDDEVFTAVGIVPDIAIGEKVSVYGEFYFHPVY
GQQLKVSYLEKLLPQTKDEIYLYLSSGVIKGIGQKTAKKIVDTFGDDTARILQEEPEKLL
SIRGMTPEKVERIKNMFAFQKFLKDIMSIFSRYGFSQNHAMRLFKLYGFSALSLLQENPY
FLLDVFPELDFKKVDRLALDMGVMLDDRRRISAKILNLLTLAANSEGHTCLPENRLKQIC
SKTLDLPVEKIEEALESLAQERRVVKDEVESQTMIFLYGYYECERYIADKILSMLKEYDD
IADIDEKISLFEAKNGIAFSPNQKKAIKMALTQGVSIITGGPGTGKTTIIKCIIEIFEGA
GKKVFLCAPTGRAAKRMQTACEKEAKTIHRLLEMTVLDTHVIFQRGPNNPLKCDVVVVDE
MSMVDSFLMNYLLSAIKPTTRIVLVGDKDQLPSVGAGNVLKDLIKSQIVPCTILSDVYRQ
SENSFIVLNAHRINKGEFPYLQKESDFYFIQKNSQEEILKTVVELVTKKLPNYLSCDPMT
DIQVLCPSKKGLVGMYNLNRVLQQYLNPPSSHKREYVFKENLFRVGDRVMQVKNNYSLEY
EVIQGEEKGRSSTGIFNGDIGVVKDIDRVQGVLEILFDDEKLVYYDFSLLDDLELAYAMT
VHKSQGSEFRCVVMPIVETYPILMTRNLLYTAVTRAKELVVLVGKKSALEYMIANQKEAM
RYSALCDFLLRGQENMQLRAL

NT seq 2226 nt +upstreamnt +downstreamnt
atgcagcaaaacattcaaggtatggtgagcgatataatctacaggaatttggaaaatagc
tatacggtgtttgagataatctgcgacgatgaggtgttcacagcagtagggatagtacca
gacattgctatcggcgaaaaggtgagcgtatacggtgagttttattttcatcctgtttac
ggtcagcaactgaaagtaagctaccttgaaaaacttttgcctcagacaaaggatgagata
tatctttacctttcttcaggagttataaaaggtatcgggcagaagacagcaaagaagatt
gttgatacatttggagatgacactgcaagaattttgcaggaagagcctgaaaaacttttg
agcattcgcggcatgacccccgaaaaggttgagcgaataaaaaatatgtttgctttccag
aaattcttgaaagatatcatgtcaatcttttcccggtatggattttcacagaaccatgca
atgagactttttaaactttatggattttctgctctgtcgcttttacaggaaaatccatat
tttcttttagatgtgtttccggaacttgactttaaaaaggttgacaggcttgcacttgac
atgggagttatgctggatgacagaagaagaatatctgcaaaaatactcaatcttttgaca
ctggcagcaaatagtgagggacatacctgtctgccagagaataggctcaaacagatttgt
tcaaaaacacttgaccttccagtggaaaaaatagaagaggcgcttgaatctttagctcaa
gaaagaagagttgtaaaagatgaagttgaatctcaaacgatgatatttttgtacggctat
tatgagtgtgaaaggtatatagcagataaaatcctgtcaatgctaaaagaatatgatgac
attgctgatatagatgaaaagatctctctgtttgaagcaaaaaacggcattgcattttcg
ccaaatcaaaagaaagccattaaaatggcgcttactcaaggtgttagcataatcacagga
ggtcctggtacgggaaagaccaccattataaagtgtataattgagatttttgaaggtgcg
gggaaaaaagtttttctctgtgcaccgacaggaagagctgcaaagcggatgcaaacagcc
tgtgaaaaagaagcaaaaacaatacacagacttttagagatgacagtattagatacacat
gttattttccagagagggccaaacaatcctttgaaatgtgatgttgtagttgttgacgaa
atgagtatggtagacagttttcttatgaactatttattgtctgcaataaagccgacaacc
agaattgttcttgtcggagacaaagatcagcttccgtctgttggagctgggaatgtattg
aaagatcttataaaaagtcagattgtaccatgtactattctgtcggatgtttaccgtcag
agcgaaaatagttttatagttttaaatgcgcacaggataaacaaaggagagtttccgtat
cttcaaaaggagagcgatttttattttatccagaaaaattctcaggaagagattttaaaa
actgtggttgagcttgtaaccaaaaaacttccaaactatctttcgtgcgaccctatgaca
gacattcaagttctttgtccgtctaaaaaagggcttgttgggatgtacaacttgaaccgg
gtgctgcaacagtatttgaatccgccttcttctcataaaagagaatatgtttttaaagaa
aacctgttcagggttggagacagggtaatgcaggtgaaaaacaattattcgctggaatat
gaagttatacaaggagaagagaagggcaggagctcaacaggaatattcaacggtgatatt
ggagttgttaaggacatagacagagtacagggtgtgctggagatcctgtttgacgacgaa
aaacttgtatattatgacttttcgcttttagacgatctggagcttgcatatgcaatgact
gttcacaaatcgcaggggtctgagttcaggtgcgtggtaatgcccattgttgagacctac
cccattttgatgacaagaaaccttctttacactgctgtaacacgggcaaaagaacttgtt
gtgctggtgggtaaaaaaagtgctttagagtacatgatagcaaaccagaaagaggctatg
cgatattcagcactttgcgactttttattgcgcgggcaagaaaatatgcaattgcgagct
ttataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (34)   
   Pfam (34)   
All databases (43)   

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