KEGG   Carica papaya (papaya): 110807650
Entry
110807650         CDS       T05151                                 
Name
(RefSeq) protein CHROMATIN REMODELING 8 isoform X1
  KO
K10841  DNA excision repair protein ERCC-6
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    110807650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpap03036]
    110807650
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110807650
Chromosome and associated proteins [BR:cpap03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    110807650
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      110807650
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII
Other DBs
NCBI-GeneID: 110807650
NCBI-ProteinID: XP_021888518
Position
Unknown
AA seq 1214 aa
MEEEEDRAWLSSLGVTSANPEDIERDILAKAKNNVENNSQVDGNADVESLNNLESDDPSS
TSQAKLLKKLRAVKFEIDAVVSTVDQCRDASSNDDHAGDGIHKNYREDDEHALQASCNDL
TLQHALAADRLRSLKRTKAEIEKKLSGLGNSASKGIEHDKLIRNLVKEEPRHKRKAKEPQ
KPSKNKEKRQKTISFDHDADFDAVLDAASAGFVETKRDELIRKGVLTPFHRLKGFERRVQ
QRRPTNQNSIPKKEDEGDDMASSSIAKVVQAMSEAAQARPTTKLLDQDVLPRLDAPTFPF
QRLKKPMKVSDSQESDPEKRKGSKGKKKRPLPEKKWRERISREENDMEEIVYNDVAEDGK
GNLVTSSCEEDQQENVDSADFVMLEGGLKIPDSIIGKLFDYQKVGVQWLWELHCQRAGGI
IGDEMGLGKTIQVLSFLGALHFSKMYKPSIVVCPVTLLRQWKREARKWYPSFHVELLHDS
AQDSGYRKKSAKSSGSDYDSEDSRDSDYEGELPSKSTKKWDSLINRVLSSESGLLITTYE
QLRLLGGKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRVIMTGAPIQNKLSELW
SLFDFVFPGKLGVLPVFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRM
KADVNAQLPKKTEHVLFCSLTAEQRSIYRAFLASSDVEQILDGNRNSLYGIDVMRKICNH
PDLLEREHSHQNPDYGNPKRSGKMKVVEQVLSVWKEQGHRALLFAQTQQILDILENFLVA
SGYTYRRMDGLTPIKQRMALIDEFNSSTDVFIFILTTKVGGLGTNLTGANRVIIFDPDWN
PSTDMQARERAWRIGQKKDVAVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFK
ARDMKDLFTLNDDGDTGATETSNIFSQLSEDVNVIGVQKDKQDSQKHCKSSAVHEDEVAE
AGPSSSREKEKADESTGDNEETNILRSLFDTHGIHSAVNHDAIMNAHDEEKMRLEEQASQ
VAHRAAEALRQSRMLRSHDSISVPTWTGKSGSAGAPSSARQKFGATMNSQLIKTSNESSS
NRTGIPNGFAAGASAGKALSSAELLARIRGNQERAIGAGLEQQFGSGSRSADIATSRSSQ
QLTGVQPEVLIRQICSFIQQRGGSTDSASIVQHFKDRIPSKDLPLFKNLLKEIATLQKGP
NGSFWVLKRDYLDD
NT seq 3645 nt   +upstreamnt  +downstreamnt
atggaggaagaagaggatagagcttggcttagtagtttaggggtgacatctgcgaaccct
gaagatatagaacgggatatactagcaaaggcaaaaaacaatgtggagaataatagtcag
gtggatggaaatgctgatgtggaatctcttaacaatttagaaagcgatgatccatcctct
actagccaagcaaaacttttgaaaaaattaagggctgtaaaatttgaaatagatgctgtt
gtatctactgttgaccaatgtagagatgcttcaagcaatgatgaccatgctggcgacggc
attcacaaaaattacagagaggatgatgaacatgctcttcaggcatcttgcaatgattta
actctgcagcatgccctagcggctgaccgactaagaagtcttaagagaactaaggctgaa
attgaaaaaaaactgtcaggtctgggtaacagtgcttcaaagggtattgagcatgataaa
ctgataagaaatttggtgaaggaagagcctagacacaaaagaaaagcaaaagaacctcag
aagccaagcaaaaataaagaaaagcggcagaaaacaatttcatttgatcatgatgcagat
tttgatgctgtcttggatgcagcatctgcaggatttgttgaaacaaaaagggatgagtta
attcggaaaggagttttaactccttttcatagacttaagggctttgaacgccgagttcaa
caacgaaggccaactaatcagaacagtatacccaagaaagaagatgagggggatgatatg
gcgtcttcaagtattgccaaagttgtccaagctatgtcagaggctgcacaagcacgcccc
acaaccaagttacttgatcaagatgttttgccaaggcttgatgctcccacattccctttc
cagaggctaaagaaacccatgaaggtttctgattctcaggaaagtgatccagagaagagg
aaaggttcaaagggtaaaaagaagcgacctttgcctgagaagaaatggagagagcgtatt
tctcgggaggaaaatgatatggaagaaattgtttataatgatgttgcagaagatgggaag
ggcaacttggtcacttctagttgcgaggaagatcagcaagagaatgttgacagtgcagat
tttgtaatgcttgaaggcggattaaaaataccagacagtataattggcaaactttttgac
tatcaaaaggtgggtgttcagtggttatgggaactgcattgtcaaagggcaggtggcatt
attggagatgaaatgggccttggtaagaccatccaggtcctatctttccttggagctttg
cacttcagtaaaatgtacaaaccaagcattgttgtctgccctgttacacttctgcggcaa
tggaaaagggaagcacggaaatggtacccaagctttcatgtggagttacttcatgattct
gcacaggactctggttacaggaagaagtcagccaaatcttctggaagtgattatgatagt
gaggattcaagggacagtgattatgagggagagttaccatctaaaagtaccaaaaaatgg
gactccttaataaatcgagttttgagctcagagtctggattgctcattaccacttatgag
caacttcgtttgctaggaggaaaactactcgacattgaatggggttatgcagtcttggac
gaaggccaccgaattcgaaatccaaatgctgaaattactcttgtctgcaaacagctgcag
accgttcatcgagtaataatgactggtgccccaattcagaacaagctctctgaattatgg
tccttgtttgattttgttttccctggaaagttgggggtcttgcctgtgtttgaggcagag
tttgcagtccccatatctgttggtggttatgcaaatgcttcaccgttacaagtgtcaaca
gcctacagatgcgctgttgttctacgtgacttgatcatgccttatctccttcggcgaatg
aaggctgatgtgaatgctcaacttcccaaaaagactgagcatgtcctcttctgcagcctc
actgcagaacaacggtccatctatcgagcgtttcttgctagctctgacgtggaacagatt
ttggatgggaatagaaattctctttatgggattgatgtgatgcgtaagatatgcaatcac
cctgatctgcttgagagagaacattctcaccagaacccagactatggaaatcccaaacgt
agtggaaagatgaaagttgttgaacaagtgcttagcgtttggaaggagcagggtcatcga
gctcttcttttcgcacaaactcaacaaatactagatattttagagaatttcttggttgct
agtggttatacttatcggagaatggatggtcttactcctattaaacagaggatggcctta
attgatgaatttaatagctcaactgatgtatttatcttcattctaacaacaaaagttggt
ggtttggggacaaatctaaccggtgcaaacagggtgatcatctttgatcctgactggaac
ccttcaactgacatgcaggcaagggagcgagcctggcgtataggacaaaaaaaggatgta
gctgtatatagactgatcactcgtggaactattgaggagaaggtgtaccacaggcaaata
tacaaacatttcctcaccaataagatactgaagaacccacaacagagaagatttttcaaa
gcccgggatatgaaagatcttttcactctgaatgatgatggagatactggggcaactgaa
acttctaacattttcagtcagttgtctgaggatgtcaatgtcatcggggtacagaaagat
aagcaggacagccaaaaacattgcaaatcttctgcagtgcatgaggatgaagttgcagaa
gctggaccatctagcagcagagagaaagaaaaagctgatgagagcactggtgacaatgaa
gaaacaaacattttgaggagtctttttgatactcatgggatacatagtgctgtgaatcat
gatgcaattatgaatgcccatgatgaagaaaagatgaggcttgaagaacaagcttcccaa
gtcgcacatcgagcagcagaagcattacgccaatcccgaatgcttcgaagccatgacagt
atatctgtcccgacatggactgggaaatcaggaagtgctggtgcaccatcatctgctcgt
cagaagtttggagcaactatgaactctcaattaatcaaaacgtcaaatgaatcatccagc
aacagaacaggtatcccaaatggatttgctgctggagcatctgcaggtaaggcattatct
tcagcagaattacttgctagaattcgaggaaaccaagaaagagcaattggagctgggcta
gaacagcagtttggttcaggctcaaggtctgcagatattgcaacttcgagatcttcacag
cagttgacaggagttcagcctgaggtattgattcgtcagatctgctcatttatccaacaa
agaggtggaagcactgattcagcaagcatagtgcagcatttcaaggacagaataccctcg
aaagatctgccattatttaagaatcttttgaaagaaatagctacattgcagaaaggccca
aacggatcattttgggttctgaaacgagattacttggacgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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