KEGG   Carica papaya (papaya): 110816125
Entry
110816125         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpap04131]
    110816125
   04121 Ubiquitin system [BR:cpap04121]
    110816125
Enzymes [BR:cpap01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110816125
Membrane trafficking [BR:cpap04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    110816125
Ubiquitin system [BR:cpap04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110816125
SSDB
Motif
Pfam: zinc_ribbon_9 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-HC5HC2H Anti-TRAP zf-HC5HC2H_2 CxC4 zf-Nse Rad50_zn_hook
Other DBs
NCBI-GeneID: 110816125
NCBI-ProteinID: XP_021899861
Position
Unknown
AA seq 344 aa
MSSSGQPYFCYQCNRTVRISPSPSPSSDLLCPTCNGGFLEELENPNPNQQTLNLNPFDFP
FTFLSSPNSPHPSDDLSTFFAXMVPPPPTPPSATARPNDTEVFNPFLFFQNYSQTLRANG
ANIQFEIDNNSPGESGPSGAFRLTGSLNLGDYFLGPGLEQLIQQLAENDPNPHGTPPASK
SAIEALPTIKISQEMLDSDSSQCAVCKDSFELTEEAKQMPCKHIYHSQCILPWLELHNSC
PVCRYELPTDDADYEHRTRANRTPTQNGTGSTDSVNAAADGNSGNRDNPETPRSVERSFR
ISLPWPFRLSFSSGAETSNSGTGXSDADTNTGSRGSETRHEDLD
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtcttcctccggccaaccctatttctgctaccagtgtaatcgaaccgtcaggatctct
ccttccccttctccttcttccgatctgctttgtcccacctgcaatggtggatttcttgaa
gaactcgaaaaccctaaccctaatcaacaaactctcaacctcaaccctttcgattttccc
ttcactttcctgtcctcccccaactctccccatccttctgatgatctctctactttcttt
gcgnagatggttcccccccctcccacccccccctccgccactgctcgtcccaatgacacc
gaagtctttaatccgtttctctttttccagaattattcccaaaccctacgagccaacggc
gccaacatccagttcgagattgacaacaattcccctggggaatccggaccgtccggtgcc
tttcgtcttactggcagcctcaaccttggggattacttccttggtcctggtcttgagcag
ttgattcaacagctcgctgagaatgatcccaatccccatggtacgcccccagcttccaag
tctgcgatagaggctcttcctaccatcaaaatttctcaagaaatgctggattctgactcc
tctcagtgcgcggtttgcaaggatagttttgagcttaccgaggaggcaaagcagatgcct
tgtaagcacatctaccattctcagtgcattctcccttggctggaattgcacaattcttgc
ccggtttgtcgctatgaattgcctactgatgatgctgattatgagcaccgcactcgtgcc
aatcgaactcctactcaaaatggtacgggctctactgattctgtcaacgctgctgcggat
ggaaattccggtaacagagacaaccctgaaacgcccaggtcggtggagaggagttttagg
atttctttaccgtggccattcaggttgtcattcagttctggtgcagaaactagcaacagt
ggcactggcngcagcgatgcggacacaaacactggaagtcgaggttcagagaccagacat
gaagatcttgattga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (54)   

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