KEGG   Carica papaya (papaya): 110819281
Entry
110819281         CDS       T05151                                 
Name
(RefSeq) nuclear pore complex protein NUP88
  KO
K14318  nuclear pore complex protein Nup88
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110819281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110819281
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110819281
SSDB
Motif
Pfam: Nup88 Cluap1 Peptidase_M30 Pox_D2
Other DBs
NCBI-GeneID: 110819281
NCBI-ProteinID: XP_021904103
Position
Unknown
AA seq 811 aa
MRLNFELPVSKSEESRSLTPKEEVQWVALKDHPVFCPDASSSFPPVAANKNGILSRFPRN
LIAWDGASRLYFWDSARKCLHRISLRLGEPEPTSVLAAFPSKVMQADVELDFAVEKISIN
RDGSALLLAGSSGLSVMYLYGRTSRKDNNIICRTVKVGAQFYFDSSNMIRMLQVSWHPYS
NTHLGIISSDSVFRLFDLSSDLVQPEQEYFLQPLEPGRSRSAASICPVDFCFGGYHLWDR
FSVFILFSDGSIYIICPVVPFGSAYKWESILEIYNDAQVFGVKSANSTAVRNSNIAISWL
EATFPELAQREMDDGNLPMLKAHPHTLFDASLALQGPLRKVCISKEDEALAVQGAECEGH
AVSLLYNLVSKDSILVTAWSGGQLQIDALADEIQPVWIFGSPPRLRVDAHGHILGLAMIC
ESISGELSVVKLDQPLDHTVWLGHPPPLLRLAIVDLAFPKQTEGGSTITMFVDSLMPERI
YFLHDGGIDSIVLHFLPFSSQTSGKDESIKVPTVHPVVSTCQGEASSSPLVGFISLSDSF
GFSWIVGVTCTREFIVLEMKMWDLLVSVHVDSEKKANREEQKEIDTPDIISKELLSGPKV
VLVPQASPNLRSVSADSIEGRSTLHQYFKLFHENYVEYAHKVYFELKHHGPHIKRVIDDQ
HARLAEAQQKMLKVEEKQSLIKERIDHAFQQHNVLEQRLQHLRSLPGAHKKPLSKAEKEL
KSGLDRFTGVELDAMRYSIEALRARLRRHTQSPKGTVGNQQRQIPKQSYIQDSRITQLKS
SLAKLSIVNSENSKKVKLLESVLKNCESSKI
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagacttaatttcgagttaccggtgtcgaagtcggaggagagccgatccctgacgccg
aaagaggaagtccagtgggtcgcgctcaaggaccacccagtcttctgccccgatgcctca
tcttcctttcctcctgtggccgccaacaaaaatggcatcctctcgcgcttccccaggaac
ctaattgcgtgggacggagcgtctagactctacttctgggactctgctaggaagtgcctc
caccgcatatctcttcgattaggtgaacccgagcctacttcggtcctcgccgccttccct
tctaaggtaatgcaagcagatgtggagctggatttcgcggtggagaaaatctccattaat
agagatggatccgccttactccttgctggttcaagtggtttatctgtcatgtatctctat
ggacgcacttccaggaaggacaacaacattatttgcaggactgttaaagttggtgcacaa
ttctatttcgacagcagcaatatgatacgcatgctacaagtttcatggcatccttacagc
aatacccatctaggaattatttcttctgattctgttttcagactttttgatctatcttca
gatcttgtgcaaccagagcaagaatattttcttcagcctcttgaaccgggaagatctaga
agtgctgcatcaatctgccctgttgatttttgttttgggggataccacttgtgggacagg
ttcagtgtctttatattattcagtgacggttcaatttacataatttgcccagtggttcca
tttggaagtgcttacaaatgggaatcaattctggagatttataatgatgctcaagtgttc
ggggtgaaatcagccaattcaacagctgttcgtaattctaatattgcaatctcttggttg
gaagcgacatttccggagttagctcaacgagaaatggatgatgggaatctacctatgcta
aaagctcatcctcataccttatttgatgcatcactggctctgcagggtcctctacgtaaa
gtatgtattagcaaagaggatgaggctttagcagttcagggagcagagtgtgaaggtcat
gcagtcagtcttctttataatttggtcagcaaggattcaattttggtgactgcctggagt
ggtgggcaattgcaaatagatgccctagctgatgaaatccagccagtatggatattcgga
agtccacctcgtcttcgtgtggatgcgcatggccatattcttggtcttgccatgatttgt
gaatcaatttcgggtgaactttctgttgtgaaacttgatcaaccacttgaccatacagtc
tggttggggcatccaccaccattgttgagactggctatagtggatttagcctttcctaaa
caaactgaaggtggttccacaattacaatgtttgttgattcgctgatgccagaaagaatt
tatttccttcatgatggtggaattgattccatagtattgcattttctccctttttcaagc
cagaccagtggaaaggatgagagtatcaaagttcccactgtgcatcctgttgtaagtaca
tgccaaggagaagcctcctcatcacctctagtcggcttcatttccttgtccgactcattt
ggtttctcatggattgtgggagtcacctgtaccagagaattcattgtgttagagatgaaa
atgtgggatctattggtttctgttcatgtcgattcagagaagaaagctaacagggaggag
cagaaagagattgataccccagatatcataagcaaagaactccttagtggtccaaaggtg
gtccttgttcctcaggcttcaccaaatctacgttccgtttctgctgattctattgaaggt
cgatcaactcttcatcagtacttcaagcttttccatgaaaattatgttgaatatgcacat
aaggtgtattttgagctcaaacatcatggccctcatataaagagagtcattgatgaccaa
catgcccgtttggctgaggcacaacagaagatgttgaaagtggaggaaaagcaatcacta
ataaaggagagaattgaccacgcattccagcaacacaatgttttggaacagcgcttgcaa
catcttaggagcttacctggggcacataagaaaccattgtctaaagcagagaaagaattg
aagtctgggcttgatcgatttacaggagttgagttggatgcaatgcgttattctattgaa
gctttaagagcgagactgagaagacacactcaatctccaaaaggcactgtagggaaccag
caaaggcaaataccaaagcagagttacatccaagacagtcgaatcacccagctgaagtca
tcacttgctaaactttctattgtcaatagtgagaattcaaagaaggttaagcttctggaa
tctgtcctgaaaaactgtgaaagcagcaaaatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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