KEGG   Carica papaya (papaya): 110819449
Entry
110819449         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 8-like
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110819449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110819449
   03036 Chromosome and associated proteins [BR:cpap03036]
    110819449
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110819449
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     110819449
Chromosome and associated proteins [BR:cpap03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    110819449
SSDB
Motif
Pfam: DEAD Helicase_C TFIIA CMS1
Other DBs
NCBI-GeneID: 110819449
NCBI-ProteinID: XP_021904338
Position
Unknown
AA seq 498 aa
MNSRGRYPPGIGAGRGAVNANPSFQSRTQPQQQYVQRGFAQNHQQFQHQHQQQQQQQHQH
HQQQQWLRRAQLVGNSNDAAVDEVEKTVQSEAVDPNAQDWKARLKIPPPDTRYKTEDVTA
TKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI
PALEKIDQDNNVIQVVIXVPTRELALQTSQVCKELGKHLKIQIMVTTGGTSLKDDIMRLY
QPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQI
LMFSATFPVTVKDFKDRYLQKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQ
INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL
FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL
GTEIKQIPPHIDQAIYCR
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaatagtagagggagatatcctccagggatcggtgcaggccgcggggccgtgaatgcg
aatcctagctttcagtctaggactcagccacagcagcagtacgtgcaacggggatttgcg
cagaatcatcagcagtttcaacaccaacatcagcagcaacaacaacaacaacaccaacac
catcagcagcagcagtggctcaggcgggctcagttggttggaaacagcaacgacgccgca
gttgatgaggtcgaaaagaccgttcaatctgaagcagttgaccctaatgcacaggattgg
aaggctaggctaaagataccaccacctgatactcgctataaaacagaggatgtgacagcc
accaaagggaatgaatttgaggattattttctgaaacgcgaacttcttatgggaatatac
gaaaagggttttgagaggccatccccaattcaggaagaaagtattccaattgctttaact
ggtagtgatattcttgcaagggctaaaaacgggactgggaagacagctgcattttgtatt
cctgccttggaaaaaattgatcaagataacaatgttattcaagttgttatcnctgttcca
actcgagaattggctcttcagacatcacaagtctgtaaggagcttggcaagcatttgaaa
attcaaatcatggtgaccacaggtggtacaagtctgaaggatgatatcatgcgtttatat
caaccagtccatttgcttgttggaactcctggaagaatattagatcttgcaaaaaaaggt
gtttgcattttgaaagattgttccatgcttgttatggatgaggctgataagcttttgtct
cccgagtttcaaccttctgtagagcagctgatacggtttctcccagctaatcgtcagatt
ttgatgttttcagctacatttcctgtcactgttaaggactttaaagatagatatttgcaa
aagccttatatcattaatcttatggatgagcttactctgaagggtatcacacaatattat
gcttttgttgaagaaagacagaaagtccactgtctaaatacacttttctccaagttgcaa
atcaatcaatcaatcatcttctgcaattcagtgaatcgtgtagaactgttggctaagaaa
attacggaacttggttattcttgcttttacatacatgcaaagatgttgcaagaccaccgc
aacagagtgttccatgatttccgcaatggtgcatgcaggaatcttgtttgtactgatctg
tttacacgtgggatagacatccaagctgtgaatgttgtgattaactttgatttcccaaag
aactcagagacatatctgcacagagttggtcggtccggaaggtttggacatcttggtttg
gctgtgaatttgatcacttatgaggaccgcttcaacttgtacaggattgagcaagaactt
ggaactgaaatcaaacaaattcctccacatattgatcaggcaatttattgccggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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