KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111777884
Entry
111777884         CDS       T05351                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cpep01002]
    111777884
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111777884
   04121 Ubiquitin system [BR:cpep04121]
    111777884
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111777884
Peptidases and inhibitors [BR:cpep01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   111777884
Membrane trafficking [BR:cpep04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    111777884
Ubiquitin system [BR:cpep04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    111777884
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 111777884
NCBI-ProteinID: XP_023513383
Position
LG16:818246..824548
AA seq 548 aa
MKRVKEASMKNFLRRLQPVGFYVFVAGLLSAAALFSVIRDGKLNNIGLLSWTAGASSSQN
LRLVPGLQNLGNNCFFNVILQALASCVFFQPFLHKLMEEFELHEEMSDALPLTISLAALL
EELSAISSERVVLSPRKVMLAMAYYAPNFNLTSQQDAAEAFLHLLSSLKEEISDYNHPPQ
CSLVDVLASNGRIITSRSKSPSELERWQGHFLVPFDGILGSILTCQSCSSQISLSFESFH
NLPLSPVLRGDSTIVFGCTLMDCLKQFFAAEKVENYRCSSCWHDAGLKYLSSMGASKMEI
EELMKCDGQDSCVCDRLFDLYKVPWSNKFSFTLKQLSIAHCPKILCIHLKRVSTNMFGDA
LKLQGHISFPLILDMSPFMLTGVEIKDIEKQLGKQHSSNKKPSHRLDFFRRQFDTTMLNY
INGLTGEDDYPTNLASGEPFCSNQLKPSAEETSSSETRASSETWDSLDTRTSQIEPSETF
LYRVVSVVQHFGRAGGGHYTVYRRVQDSDARLQDVSTEWFHVSDSEVHLVSEEEVLAAEA
TLLFYERI
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgaagcgggtaaaagaagcatctatgaagaacttcctccggcgattacaaccagtgggg
ttttacgtgtttgttgctggacttctcagcgccgccgctctgttttcggtcattagagat
ggtaaactcaacaatataggccttttatcctggacggcgggtgcaagttcgtcccagaat
cttcgcctagttcctggattgcaaaatctcggaaacaattgctttttcaatgtgatttta
caggctttagctagctgtgtgttttttcaaccttttcttcacaagcttatggaggaattt
gaacttcacgaggaaatgagtgatgccttaccacttacgatctctttagctgcactatta
gaagagctaagtgcaatctcttcggagagagtcgtgttgagcccgaggaaagtaatgctt
gcaatggcttattacgctccgaatttcaatctaacaagccagcaggatgcagcagaagca
ttccttcatcttctttcttcattaaaagaagagatttcggattataatcatccaccgcag
tgttcgttagtcgatgtgttggcttctaatggtaggattattacttccaggagtaagagc
cccagtgagcttgaaagatggcaaggtcacttccttgtaccatttgatggtattcttggt
agcatcttaacttgtcaaagttgttcttcccagatctcactgagttttgaatcctttcac
aatttgcccctttcaccagtgcttaggggtgattctactattgttttcggctgtacgttg
atggattgcttaaagcagttctttgctgctgaaaaggtcgagaattatcgttgcagctct
tgttggcatgatgctggcttaaagtatctgtcctcaatgggagcatctaaaatggagatt
gaagaacttatgaagtgtgatgggcaagattcttgtgtttgtgacagactttttgattta
tataaagttccatggtcaaataagttttcattcaccttaaagcaactcagtattgctcac
tgtccaaagattctatgcatccatctaaaacgtgtttcaacgaacatgttcggtgacgca
ctcaaacttcagggccacatttctttcccgctgattttggacatgtcgccgttcatgttg
acgggagtagaaataaaagacatagaaaaacaactcggaaagcaacattcatcaaataaa
aaaccgagccaccgtctcgatttcttcagaagacagttcgataccacaatgctaaattac
ataaacggactaacaggagaggatgactaccctacgaatctcgcctcaggtgagcccttt
tgctcaaaccaattaaaaccttccgccgaagaaaccagttcttctgaaactcgagcgagc
tcggaaacctgggattccctggacactaggactagccaaatcgaaccgtcagaaactttt
ttgtatcgagtcgtttcagttgttcagcatttcggtagagccgggggtggccattacacc
gtttaccgaagagttcaagatagcgatgcacgtttgcaggatgtctctacagaatggttt
catgtatcagattcagaagttcatcttgtttctgaagaagaagttcttgcagctgaagct
accttgctgttctatgagagaatctag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system