KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111783233
Entry
111783233         CDS       T05351                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 1
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    111783233
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cpep01002]
    111783233
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cpep04131]
    111783233
   04121 Ubiquitin system [BR:cpep04121]
    111783233
Enzymes [BR:cpep01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     111783233
Peptidases and inhibitors [BR:cpep01002]
 Metallo peptidases
  Family M67
   111783233
Membrane trafficking [BR:cpep04131]
 Endosome - Lysosome transport
  Others
   Others
    111783233
Ubiquitin system [BR:cpep04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    111783233
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 111783233
NCBI-ProteinID: XP_023519907
Position
LG20:697630..704356
AA seq 501 aa
MRSSSERINIAASTRRLNVDNRFPLRYYYRVADNVLKQADIFRAEKNIIDLYVMLMRFSS
LITETIPRHWEYGTSLKSQKNYFRKKLLNALSELEELKPSVQRKVDEINGKQKYHVNGRG
NQHQNGSSDWHSGGKQYLIDNGTARAGRSAATELALQGSGPQQFSYSRSIHIPLPTEETL
SRHSILGPNGLHGKWQPPIVDKGVQYPRILDLSPIEIPSLQQSIETKLTIEKDLGNLEKE
RPDIHSICTEDNDCKINNAVETDSLISFEKVEMPAPVEIVRQPSPPPVLAEVQDLIPAMS
PQVPEVECAQDTSLSDGFVHPEASMQLHISTKMMESFMRLAKSNTAKNLETCGVLAGSLK
NRKFYITALIVPKQESTTNTCQATNEEEIFDVQDKRSLFPLGWIHTHPSQSCFMSSVDVH
THYSYQVMLPEAVAIVMAPQDSARTHGIFRLTTPGGMSIIRQCQQRGFHSHGQPPDGGPI
YKTCTDVYMDPNLKFDVIDLR
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgagatcttcttcggagcgaatcaacatcgccgctagtacccggcgcctcaatgttgat
aaccgatttcctcttcgttattactatcgagttgctgataatgttttgaaacaggctgac
atctttcgagcagagaagaacataattgatctttatgtcatgttaatgagattttcaagt
ttgatcactgagacaatacctcgtcattgggagtacgggacatctcttaaatctcaaaaa
aattattttagaaagaaactattaaatgctttgagcgagcttgaagaattgaagccatcg
gttcaaagaaaggtggatgaaataaatgggaaacaaaaatatcacgtcaatgggcggggt
aatcagcatcaaaatggttcatcggattggcattctggtggaaagcaatatcttattgat
aatggcacggctagggctggtagatcagctgctacagaacttgctcttcagggttcaggg
cctcagcaattttcgtattccagatctattcatattccactcccaacagaggaaacatta
tcccgccattctattttgggtcccaatgggcttcatggcaagtggcaaccacctatcgtt
gataaaggggtccaatatccacgtattttggatctgtctcccattgaaattccaagctta
caacaatcaatagaaaccaaacttacaatagaaaaagatcttggaaacttggaaaaagaa
agacctgatatacactcaatctgcaccgaggataacgattgcaagataaataatgccgtg
gaaacagattccttgatctcctttgaaaaagttgagatgcctgcccctgttgaaattgtc
cgacagccttctcctccacctgtgcttgctgaagtacaggatctgatacctgcaatgtca
cctcaagttcccgaggtagaatgtgcacaagacacttcgttgtcggatggttttgttcat
ccagaagcttcaatgcaattgcacatctcgaccaagatgatggagagcttcatgaggcta
gccaagtcaaatactgccaagaatttggaaacttgtggtgttcttgccggttcgcttaaa
aacagaaaattttatatcactgcactcatcgtaccaaagcaggaatcaacaacaaatact
tgtcaggcgacaaatgaagaagagatatttgacgtgcaggataagcgctctctattccca
cttgggtggattcatacacatccttcacagtcatgcttcatgtcgtcggttgatgttcac
acacattactcatatcaggtaatgttgcctgaagctgttgcaattgtgatggctccccag
gacagtgcaagaacccatggcattttccggttgacaaccccgggtggcatgtcaataatt
aggcaatgccaacaacgtggctttcactcgcatggtcagcctcctgatggtggacccatt
tacaaaacctgtacagatgtatacatggatcccaatctgaaatttgatgtcattgatctt
cgataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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