KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111793469
Entry
111793469         CDS       T05351                                 
Name
(RefSeq) sorting and assembly machinery component 50 homolog isoform X1
  KO
K07277  outer membrane protein insertion porin family
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:cpep03029]
    111793469
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:cpep02000]
    111793469
Mitochondrial biogenesis [BR:cpep03029]
 Mitochondrial protein import machinery
  Outer membrane
   TOB/SAM complex
    111793469
Transporters [BR:cpep02000]
 Other transporters
  Pores ion channels [TC:1]
   111793469
SSDB
Motif
Pfam: Omp85 POTRA
Other DBs
NCBI-GeneID: 111793469
NCBI-ProteinID: XP_023531139
Position
LG01:18917829..18923361
AA seq 543 aa
MADYEEEGKGSIRLNSEEEEAEREPSIFENDDEEDEDDGDEEDEGEEDETENDEEPLRRK
PLSDASRLIGQRSKLENLAERMRKEKIRLRVHDILIKGNTKTKESIIEAEVEAIKNASTM
QELLEAAAVANAKLQRLEIFDSVKITLDSGPPELPGTANVVIEVVETSNPLSGECGAYTK
PAARSWTFEGSVKYKNWLGYGDLWDGSLAYGPNQTSEVSTGVYFPRLKRSVTPLVARLSL
LSQDWLEFSSYKERSLGLSLGLYSTKYHDLAYSLGWRTIIDPSQMASNSIRRQLGNSLLS
SLKYTLKVDKRNSAGRPTRGYAFVSTSQIGGLAPDHRSLRFVRQEFDLRYAIPLGFDRAA
MNFGVSAGVVLPWGNGFMNKPSPLPERFFLGGDFSPVCTVGGPTTVWGFKTRRMGPTEPR
REVRGENNQGENSDSPGRDFVGGDLAVTAFADLSFDFPIRWLREHGIHGHIFAGAGNLAK
LTENEFRSFSFQKFLETFRTSVGAGIVLPTRLFRLEGNFYYILKQQEHDRGKTGFRFSIS
APS
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcggactatgaggaagaaggaaaaggttcgattagactaaattccgaggaggaggaa
gcagagcgagaaccatccattttcgaaaatgacgacgaagaagatgaggatgatggagat
gaggaggatgaaggtgaggaagatgagactgaaaatgatgaagaaccactccggaggaag
cctctttccgatgcttccagattgattggtcagaggtccaaattagagaatctggctgag
cgaatgaggaaggagaagatcagacttcgggttcatgatattttgatcaagggaaacacg
aagaccaaggaatctataatcgaagccgaagtggaggctattaagaatgcatcaaccatg
caagaactactggaggccgctgccgtagccaatgccaagctccagaggcttgagatcttc
gactctgtcaagattacacttgattcaggtccgccagagctccctggtaccgcaaatgtc
gttatcgaggttgtggagacgagcaaccccctctccggcgaatgcggtgcttacacaaaa
cctgcggctcgttcgtggacgtttgaaggttctgttaagtacaaaaattggcttggatat
ggggatttatgggatggctctttggcatacggtcctaatcaaacatctgaggtgagtacc
ggtgtttatttcccgaggctgaagcgatcagtgactcctttggtggcacggctatcccta
ctttcccaagattggttagagttttcatcttacaaagaacggtctttaggtctttccctt
ggcctatattcaacaaagtatcatgatttggcatacagccttggatggcgcaccataatc
gacccttcacagatggcgtctaattcgataaggagacaacttggaaatagtttactttct
tctctaaaatatactttgaaggttgataagaggaattctgcagggaggccaactagagga
tatgcttttgtttctactagtcaaattggtggcctcgcacctgatcaccggagcttgcgc
tttgtgcgacaggaatttgatctacgttatgccattcctctcggctttgatcgtgctgcc
atgaactttggagtttctgctggtgttgtcttgccttggggaaatggattcatgaacaag
ccatcgccccttcccgaacgctttttcttaggtggtgatttctctccagtatgcaccgtc
ggaggcccaacaactgtatggggttttaagacacgtaggatggggccaactgagccgagg
cgggaagtgaggggcgaaaataatcagggtgaaaacagtgattctcctggaagggatttt
gtcggaggggatcttgctgtgaccgcgtttgctgatctttcgttcgacttcccaattcgc
tggttaagagaacatggaatccacggacacatctttgctggtgcaggaaatcttgcaaag
ttgactgagaatgagtttcgcagtttctcttttcagaagttcttggaaactttccgtacc
tcagtaggagctgggattgtgcttccaacaagactcttccgcctagagggtaacttctac
tacatattgaagcagcaagagcatgatcgtggaaaaactggctttcggtttagcatatct
gccccatcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system