KEGG T00378: CPF

Clostridium perfringens ATCC 13124: CPF_0721

Entry

CPF_0721 CDS T00378

Definition

exo-alpha-sialidase

Orthology

K01186

sialidase-1 [EC:3.2.1.18]

Organism

cpf Clostridium perfringens ATCC 13124

Pathway

cpf00511	Other glycan degradation
cpf00600	Sphingolipid metabolism

Class

Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cpf00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cpf00511]

SSDB

Motif

Pfam:

Sialidase BNR_2 BNR_3 BNR Laminin_G_3 TaqI_C

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

JCVI-Pathema:

UniProt:

Position

856777..858861

AA seq 694 aa
MNYKGITLILTAAMVISGGNYVLVKGSTLDSGKNNSGYEIKVNNSENLSSLGEYKDINLE
SSNASNITYDLEKYKNLDEGTIVVRFNSKDSKIQSLLGISNSKTKNGYFNFYVTNSRVGF
ELRNQKNEGNTQNGTENLVHMYKDVALNDGDNTVALKIEKNKGYKLFLNGKMIKEVKDTN
TKFLNNIENLDSAFIGKTNRYGQSNEYNFKGNIGFMNIYNEPLGDDYLLSKTGETKAKEE
VLVEGAVKTEPVDLFHPGFLNSSNYRIPALFKTKEGTLIASIDARRQGGADAPNNDIDTA
VRRSEDGGKTWDEGQIIMDYPDKSSVIDTTLIQDDETGRIFLLVTHFPSKYGFWNAGLGS
GFKNIDGKEYLCLYDSSGKEFTVRENVVYDKDGNKTEYTTNALGDLFRNGTKIDNINSST
APLKAKGTSYINLVYSDDDGKTWSEPQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRI
VVPVYYTNEKGKQSSAVIYSDDSGKNWTIGESPNDNRKLENGKIINSKTLSDDAPQLTEC
QVVEMPNGQLKLFMRNLSGYLNIATSFDGGATWDETVEKDTNVLEPYCQLSVINYSQKID
GKDAVIFSNPNARSRSNGTVRIGLINQVGTYENGEPKYEFDWKYNKLVKPGYYAYSCLTE
LSNGNIGLLYEGTPSEEMSYIEMNLKYLESGANK

NT seq 2085 nt +upstreamnt +downstreamnt
atgaattacaaagggataactttaattttaacagctgctatggttataagtggtggtaat
tatgtattggttaaaggaagtactttagactcagggaaaaataatagtgggtatgagatt
aaagtaaataatagtgaaaatttaagttcactaggagaatataaggatataaatttagaa
agttcaaatgcttctaatattacttatgatttagaaaaatataaaaatttagatgaaggt
actattgttgtaagatttaattccaaggactctaaaatacaaagcttattaggaataagt
aatagcaagactaaaaatggatattttaatttttatgttactaattcaagagttggtttt
gagcttagaaatcaaaaaaatgaggggaatacacaaaatggaactgagaatctagtacat
atgtataaagatgttgctttaaatgatggggataatactgttgccttaaagattgaaaaa
aataaaggttataagcttttccttaatggaaaaatgataaaagaagttaaagatacaaat
acaaagtttttaaataatatagaaaatttagatagtgcttttattggaaaaactaataga
tatggacaatctaatgaatataattttaagggcaatataggttttatgaatatatataat
gaacctttaggcgatgattatttacttagtaagactggagagacaaaagctaaagaagaa
gttcttgtagagggagctgtaaagacagagccagttgatttatttcatccaggattttta
aattctagtaattacagaataccggccttatttaaaacaaaagaaggaactttaatagct
tcaatagatgcaagaagacaagggggagctgatgcgcctaataatgacatagatacagca
gttagaagaagtgaagatggagggaaaacttgggatgaaggacaaataataatggactat
cctgataaatcctctgttatagatacaactttaattcaagatgatgaaacaggaagaata
ttcttgttagtaactcatttcccttcaaaatatggcttttggaatgctggattaggaagt
ggatttaaaaatattgatggaaaagaatatttatgtctttacgattcatcaggtaaagaa
tttactgtaagagaaaatgtagtatatgacaaagatggcaataaaacagaatatacaaca
aatgctttaggagatttatttagaaatggaaccaagatagataatataaattctagtaca
gcacctttaaaagcaaaagggacaagctatataaatcttgtatatagtgatgatgatgga
aagacttggagtgagccacaaaatattaatttccaagttaaaaaggattggatgaagttt
ttaggaatagctccaggtaggggaatacaaataaaaaatggagaacataaaggaagaata
gtagttcctgtttactatacaaatgaaaaaggtaaacaatctagtgctgtaatatatagt
gatgatagtggtaagaattggacaataggagaatctccaaatgataatagaaaattagaa
aatggaaagataataaattctaaaaccttatcagatgatgcacctcaattaactgaatgt
caagtagtagaaatgccaaatggtcaattaaaattatttatgagaaatttaagtggatat
ttaaatattgctacaagttttgatgggggagctacttgggatgagacagtagagaaagat
actaatgttttagagccatattgccaactaagtgttataaattatagtcaaaagatagat
ggaaaggatgctgttattttctcaaatccaaatgcaagaagtagatcaaatggtactgtg
agaattggattgattaatcaagttggaacatacgaaaatggtgaacctaaatatgaattt
gattggaaatataataaattagttaaaccaggttattatgcttattcttgcttaacagaa
ttaagcaatggaaatattggattattatatgagggtacaccaagtgaagaaatgtcttat
attgaaatgaatttaaaatatttagagagtggagctaataaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   JCVI-PATHEMA-CPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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