KEGG T00378: CPF

Clostridium perfringens ATCC 13124: CPF_0766

Entry

CPF_0766 CDS T00378

Definition

beta-galactosidase (EC:3.2.1.23)

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

cpf Clostridium perfringens ATCC 13124

Pathway

cpf00052	Galactose metabolism
cpf00511	Other glycan degradation
cpf00600	Sphingolipid metabolism
cpf01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:cpf00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cpf00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cpf00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Glyco_hydro_2 Octopine_DH

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

JCVI-Pathema:

UniProt:

Position

908589..911627

AA seq 1012 aa
MILKNEYHEDISKLHVNMMPRRSYYVPFVDTDEALNIKDRSKQLNFFSLNGKWEFNYFDS
LQKVKEFDDINQISFSDNIDVPSLWQLKGYDYNQYTNVKYPIPFDPPFVPINNPCGIYKR
DFEIEILPENYDYNINFEGVDSCFYFWINDNFVGYSQISHSISEFDITEFLVKGKNTITV
LVLKWCDGTYFEDQDKFRMSGIFRDVYILRRAKERIVDYKITQSIDFSAKEGKLDLEILS
NIGNPKGKYYLLNPNNHMIASGNIDNNKIQINIKNVELWSAEIPNLYTLLIETEHEVIKE
RIGMREIKIENSILKINNKKIKLRGVNHHDSNPTKGYVMTYDDMILDLKIMKECNVNSIR
TAHYPKSPIFYELCDEYGFYVMSEADIEIHGVVELYGLGYLDNYNMIADDKVYEKVIIDR
VDSSIVPFKNKSCIFMWSLGNESGFGCNFERGLEYARALDPTRPLHYEGAYYASKEREND
FTNIDVISRMYISIEEIKDYFEKGIDKPLILCEYAHAMGNGPGGLQDYDEMIQKYDQFAG
AYVWEWCDHAILINENINDKKAYGYGGDFEEENHDGNFCVDGLVYPDRTPHTGLLEYKNI
NRPIRAIEFDEVKKRVKLKNMFDFRNAGEFLDVTYKVFLDGEIIFGDDIDLESLKAKEEK
WYDLSISELPKEIITILFQYKVKNHNHLYEKGEVLGFDNFIIKNGVDNISSVDKIIKGNI
NEQKFYVEETVNKIKVINNEFIYNYNKNTGSFDFIQALGETFIDDPMKFIIWRAPTDNDR
KIKNLWIEAGFNQITTRVYNSKIKEFSNRVEITSDLSLIPPYRERVLDLKVTWSIYSEGL
IKCHVKGDKNMKTPYLPRFGVELKLNKSYEEVSYFGFGPYENYVDKNSSCYLGRFNSKVS
EMHEDYIRPQENGSHHYCREVAINNEKGKVYVLSENDFAFNVSHFSLNQLTNANHNFDLN
EEEATYLIVDYKQSGIGSNSCGPDLDEEYRLNEKEFSYDFYLKFVKDNIKDN

NT seq 3039 nt +upstreamnt +downstreamnt
atgatattaaaaaatgaataccatgaagatatttctaaactgcatgtaaatatgatgcca
agaagaagttattatgttccttttgtggatactgatgaagctttaaatattaaagataga
agtaagcaacttaacttcttttcacttaatggtaaatgggaatttaattactttgatagc
ttacaaaaagttaaagagtttgatgatataaatcaaattagtttttcagataatattgat
gttccatctctttggcaattaaagggatatgattataatcaatacactaatgtaaaatat
ccaattccttttgatccaccttttgttcctataaacaatccatgtggaatttataagaga
gattttgaaattgaaatacttcctgaaaattatgattataatataaactttgaaggcgtt
gattcctgcttttatttttggataaatgataactttgttgggtatagccaaatatctcat
agcatatctgagtttgatattacagaatttttagtaaagggtaaaaatacaattacagtc
ttagttttaaaatggtgtgatggaacttattttgaagatcaagacaagtttagaatgtct
ggaatttttagagatgtatatatattaagaagagcaaaggaaagaatagttgactataaa
ataactcaaagtatagatttttcagctaaagaaggaaagttagaccttgaaattttatct
aatataggaaatccaaaagggaaatattatttgttaaatcctaataatcacatgatagca
tctggaaatatagataataataaaatccaaatcaatattaaaaatgtagaactttggagt
gctgaaatacctaatttatataccttattaattgaaacagagcatgaggttataaaagaa
agaataggtatgagagaaattaaaatagagaattctattttaaaaattaataataaaaaa
ataaagttaagaggagttaatcatcatgatagtaatccaactaagggatatgttatgaca
tatgatgatatgattctagatttaaaaataatgaaagagtgtaatgttaactctataaga
acagctcattatcctaaatctccgattttttatgagttatgtgatgaatatggtttttat
gttatgagtgaggcagatattgaaattcatggggttgttgaactatatggattaggatat
ttagataattataatatgatagctgatgataaagtttatgaaaaggttattattgataga
gttgattcatctatagttccttttaagaataaatcttgtattttcatgtggtctcttgga
aatgagtcaggatttggatgtaactttgaaagaggattagaatatgctagggcattagat
cctacacgtccacttcattatgaaggtgcttattatgctagcaaagaaagagaaaatgac
tttacaaatattgatgttattagtcgtatgtatataagtatagaggaaatcaaggattac
tttgaaaaaggaatagacaagccattaatattatgtgagtatgcacatgctatgggaaat
ggaccaggtggattacaagactatgatgaaatgatacaaaagtatgaccagtttgcaggg
gcatatgtttgggagtggtgtgaccatgcaatacttattaatgaaaatattaatgataaa
aaagcatatggatatggcggcgattttgaagaggaaaatcatgatggaaacttctgtgta
gatggtttagtttacccagatagaactcctcatactggattattagaatataaaaatatc
aatagacctataagagccatagaatttgatgaagttaagaaaagagttaagcttaaaaat
atgtttgattttaggaatgctggtgaattcttagatgttacctataaagtatttttagat
ggagaaataattttcggagatgatatagatttagaaagcttaaaagcaaaagaagaaaaa
tggtatgatttaagcatatcagaattaccaaaggaaattataactatattatttcagtat
aaagtgaaaaatcataatcatctgtatgaaaaaggtgaagttctaggctttgacaatttt
atcataaaaaatggggtagataatatctcatctgttgataaaatcataaaaggtaatatt
aatgaacaaaaattttatgtagaagaaacagttaataagattaaagttataaataatgag
tttatttataattataataaaaatacaggttcctttgattttattcaagcattaggagaa
acatttatagatgatccaatgaaatttattatttggagagcacctacagataatgataga
aagattaaaaatctgtggattgaagctggctttaatcaaattactacaagagtgtataat
agtaaaattaaggagttttcaaatagggtggagataactagcgatttaagcttgatacca
ccatatagagaaagagtccttgatcttaaggtaacatggagtatctattcagaggggtta
attaaatgccatgttaaaggggataaaaatatgaaaacaccttatttaccaaggtttggt
gtagagcttaagctgaataaatcctatgaagaggtaagttactttggatttggaccatat
gaaaattacgtagataaaaattcatcttgttatttaggaagatttaattctaaggtttct
gaaatgcatgaagattatataagacctcaagaaaatggaagtcatcattattgtagagaa
gtagctattaataatgaaaaaggaaaggtttatgttttatcagaaaatgactttgccttt
aatgtttcacacttttctttaaatcaattaactaatgcaaatcataattttgatttgaat
gaagaagaggcaacttatttaattgtagattataaacaaagtggtataggatcaaatagt
tgtggccctgatttagatgaagaatatagactaaatgaaaaagaattttcttatgatttc
tacttaaaatttgtaaaagataatataaaggataattaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   JCVI-PATHEMA-CPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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