KEGG T00378: CPF

Clostridium perfringens ATCC 13124: CPF_0985

Entry

CPF_0985 CDS T00378

Definition

sialidase

Orthology

K01186

sialidase-1 [EC:3.2.1.18]

Organism

cpf Clostridium perfringens ATCC 13124

Pathway

cpf00511	Other glycan degradation
cpf00600	Sphingolipid metabolism

Class

Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cpf00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cpf00511]

SSDB

Motif

Pfam:

BNR_3 BNR_2 BNR

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

JCVI-Pathema:

UniProt:

Position

complement(1135175..1136323)

AA seq 382 aa
MYNKNNTFEKNLDISHKPEPLILFNKDNNIWNSKYFRIPNIQLLNDGTILTFSDIRYNGP
DDHAYIDIASARSTDFGKTWSYDIAMKNNRIDSTYSRVMDSTTVITNTGRIILIAGSWNT
NGNWAMTTSTRRSDWSVQMIYSDDNGLTWSNKIDLTKDSSKVKNQPSNTIGWLGGVGSGI
VMDDGTIVMPAQISLRENNENNYYSLIIYSKDNGETWTMGNKVPNSNTSENMVIELDGAL
IMSTRYDYSGYRAAYISHDLGTTWEIYEPLNGKVLTGKGSGCQGSFIKATTSNGHRIGLI
SAPKNTKGEYIRDNIAVYMIDFDDLSKGVQEICIPYPEDGNKLGGGYSCLSFKNGHLGIV
YEANGNIEYQDLTPYYSLINKQ

NT seq 1149 nt +upstreamnt +downstreamnt
atgtataacaaaaacaacacctttgaaaagaatctagatataagccataaaccagaacca
ctaatactatttaacaaggataataacatatggaattcaaagtattttagaattcccaat
atacaattattaaatgatggtacaattttaaccttttcagatattcgttataatggtcct
gatgaccatgcttatatagacatagcttctgcacgtagtactgattttggaaagacatgg
agctatgatatagcaatgaaaaacaatcgtattgactctacttattctcgtgtaatggac
tccacaacagttattacaaatacaggtagaataatattaattgcaggctcatggaataca
aatggaaactgggcaatgactacctccacaagaagaagtgattggtctgtccaaatgatt
tattctgatgataatggattaacttggtctaacaaaatagatttaactaaggactcatca
aaagtaaaaaatcaaccaagtaatacaattggatggttaggtggagttggctcaggtatt
gtaatggatgatggaacaatagttatgccagcacaaatttccttaagagaaaataatgaa
aataactattattcattaattatctattcaaaggataatggtgaaacatggacaatggga
aacaaggttcctaattcaaacacttctgaaaatatggtcatagaattagatggcgcttta
attatgagtacaagatatgattactctggttatagggcagcatacatctctcatgattta
ggaactacttgggaaatatatgaacctttaaacggtaaagttttaactggtaaaggctct
ggatgtcaaggttcatttattaaagctactacttcaaacggacatagaataggattaatt
tcagcacctaaaaatactaaaggtgaatatataagagacaacattgctgtttatatgatt
gactttgatgatttatctaaaggagttcaagaaatatgtattccttatcctgaagatggt
aacaaattaggcggtggatattcttgtctatcctttaaaaatggccatttaggcattgtt
tatgaagccaacggaaatatagaatatcaagacttaacaccttattactcactaattaat
aaacaataa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   JCVI-PATHEMA-CPF (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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