KEGG   Corynebacterium phocae: CPHO_08925
Entry
CPHO_08925        CDS       T05007                                 
Name
(GenBank) endonuclease
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
cpho  Corynebacterium phocae
Pathway
cpho03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cpho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CPHO_08925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpho03400]
    CPHO_08925
Enzymes [BR:cpho01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CPHO_08925
DNA repair and recombination proteins [BR:cpho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CPHO_08925
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco
Other DBs
NCBI-ProteinID: APT92991
UniProt: A0A1L7D4M7
Position
complement(1965428..1966252)
AA seq 274 aa
MPEGDSVLQLSNRLQFMVGREVTKTSVRVPRYALASFDGMTCQRIWPYGKHLLMRFDELI
LHTHLKMEGQWAMHYAGDRWRKPGHTARVVLQLAHTPRDIEVVGHSLGFVEVYPVENYEA
RIAHLGPDMLNPEWESNGDREEVIRRMLARPTRAVGAALLDQKVVAGIGNEYRAEACFIA
GVHPATPVAEVDVEKIIDISRKIMWANRNEPVRVTTGVKRGGETAYVFGRNRKRCRRCGE
LIKKDLLGGPDAGGDEGELERVIWWCPSCQPLSA
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccggagggtgattccgtcctacagctgtccaaccggttgcaatttatggttggacgg
gaagtgaccaagacgtcagtgcgggttccaaggtatgccctggcgtctttcgacggcatg
acctgccagcggatctggccctacggcaagcatctgcttatgcgctttgatgagctcatc
ttgcacacccacctgaaaatggaggggcagtgggccatgcattacgcgggggataggtgg
cgcaagcccgggcacaccgcgcgggtagtgttgcaacttgcccataccccgcgtgacatc
gaagtcgtaggccactcgctgggttttgtggaggtctatccggtggaaaattatgaagcg
aggatagcgcacctaggcccggacatgttgaacccggagtgggagtccaacggtgaccgg
gaggaggtcattcggcgcatgttggcgcggcccacacgggcggtgggagcagcgttgctg
gatcagaaggtagtggcgggtatcggtaatgaataccgtgcggaggcctgtttcatcgcg
ggcgtgcaccccgccacaccggtcgcagaggtggatgtagagaagatcattgatatcagc
cggaagattatgtgggccaaccggaatgagcccgtccgggtgaccactggtgttaagcgg
ggcggggaaaccgcctacgtgtttgggcgcaaccggaaacggtgccggcgttgcggtgag
cttatcaagaaagacttgttgggaggccctgacgccggtggggatgaaggtgagcttgag
cgggttatctggtggtgcccaagctgccagcctttgtccgcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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