KEGG   Chitinophaga pinensis: Cpin_0477
Entry
Cpin_0477         CDS       T00959                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
cpi  Chitinophaga pinensis
Pathway
cpi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cpin_0477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpi03400]
    Cpin_0477
DNA repair and recombination proteins [BR:cpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cpin_0477
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH_2 UVR 5_3_exonuc GIY_YIG_2 HHH
Other DBs
NCBI-ProteinID: ACU57975
UniProt: A0A979FZD3
Position
573583..575430
AA seq 615 aa
MTAAEFQQISHTIPLQPGIYKYYSEAGELLYVGKAKSLRKRVSSYFVKNHDNYKTRKLVE
NIHHIEFTIVGSEQDAFLLENSLIKQFQPKFNINLKDDKTYPYIVIKHESYPRVFLTRNV
IKDGSEYLGPFTSVGRVRELLEVIRYNIPLRTCNLNLSPQNVAKGKYKVCLEYHLGNCKG
PCEGLQTEEDYREGLQQVKNILRGNLSPVLQLFRTQMQEHAMNMEFEKAEIVRKKIESLQ
AYQSKSTIVGTRVGNVDVFSIISEGNYAYVNYLRVLNGTIADTKTVTLEKKLEEDDTEVL
TYAVGYLRDAFQSLAREIIVPLEIEYPEEHVTISVPKGGDKKKLLELSEKNVNYFKEELY
RKKILHLEGKSDMEKKKVLYQLQADLELQELPLHIECFDNSNFQGAYPVSACVVFKDGVA
SKKDYRHFNIKTVQGINDFASMKEVVYRRYSRLLAEQQPLPQLVIIDGGKGQLGSAMESI
RALDLIGSMTVVGLAKNEEEIFFPGDKDSIKLPYDSESLKLIRRVRDEVHRFGITFHRQK
RSKGTFKNELEAIKGIGENTATQLLKTFRSVAKIKLLSEDDLVKEIGAAKARLVYTHFHP
ATGETGPVTDADSNN
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgacagcagcggagtttcaacaaatatcacatacaataccccttcagcctggtatttac
aagtattacagcgaagcaggcgaactgctttatgtaggaaaagctaaaagcctgcgcaaa
agggtcagctcttattttgttaagaatcatgataactacaagacccgtaagcttgtagaa
aacatccaccatattgaatttaccatcgttggctctgaacaggatgccttcctgctggaa
aactcgctgatcaaacagttccagcccaaattcaatatcaacctgaaagacgataagact
tacccgtatatcgtcatcaaacacgaatcctacccccgtgtattcctgacccgtaatgtg
atcaaagacggctctgaatacctgggtccattcacttccgtaggccgcgtacgcgaactg
ctggaagtgatcagatataacattcccctgcgtacctgcaacctgaatctctctccgcag
aatgtcgccaaagggaagtataaagtctgcctggaatatcacctgggcaactgtaaaggt
ccctgtgaaggattgcagacggaagaagattacagggaaggcttacagcaggtcaaaaac
atccttcgcggcaatctctcacccgtattacagctgttccgcacacagatgcaggaacat
gccatgaacatggagtttgaaaaagcggagatcgtccgtaagaagatagaaagtctgcag
gcttaccagtctaaatccaccatcgtgggtacccgggtcggtaatgtcgatgtcttctcc
atcatcagcgaaggcaattacgcgtatgtcaactacctgcgcgtattgaacggcaccatt
gcagatacgaagaccgtcacgctggaaaagaaactggaagaagatgatacagaagtactg
acctatgccgtcggttacctccgggacgccttccagagtcttgcccgggaaatcatcgtt
cccctggaaatagaatacccggaagaacacgtcactatctctgtacccaaaggcggagac
aaaaagaaactgctggaactctctgaaaagaatgtgaactatttcaaggaggagctgtac
aggaaaaagatcctgcacctggaaggcaaaagcgatatggagaaaaagaaggtattgtac
cagttgcaggccgacctcgaactccaggaattaccattgcacatcgaatgtttcgataac
tccaacttccagggtgcttacccggtttctgcctgcgtggtgttcaaggacggtgttgcc
tccaaaaaggactaccgccatttcaatatcaaaacggttcagggtattaacgacttcgcc
tctatgaaggaagtggtataccgccgttacagccgcttactggccgaacagcaacctttg
ccgcagctggtcatcatagatggaggtaaaggacagctgggatctgcgatggaaagtatc
cgggcgctggaccttatcggcagtatgaccgtagtagggctggcgaagaacgaagaagag
atcttctttccgggagataaagacagtatcaaactgccttacgacagtgaaagtctgaag
ctgatccgtcgtgtgcgtgatgaagtgcaccgtttcggcatcactttccatcgtcagaaa
cgcagtaaaggcacttttaagaacgaattagaggctattaagggcatcggcgagaatacg
gccacccagctcctgaaaaccttccgttcggtagctaaaatcaaattattatcagaggat
gaccttgtaaaggaaataggagcagccaaggcccgtctcgtatacacacatttccatccg
gctacaggagaaacaggccctgttacagatgcagatagtaataactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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