KEGG T00959: Cpin

Chitinophaga pinensis: Cpin_6171

Entry

Cpin_6171 CDS T00959

Definition

glycoside hydrolase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

cpi Chitinophaga pinensis

Pathway

cpi00052	Galactose metabolism
cpi00511	Other glycan degradation
cpi00600	Sphingolipid metabolism
cpi01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:cpi00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cpi00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cpi00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_N Glyco_hydro_2_C Glyco_hydro_2 BetaGal_dom4_5 Cellulase Cellulase-like Big_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

7787822..7790263

AA seq 813 aa
MNKCKIALLAMVLMSVKGMSQARQEYLLEKNWKFAKGEHPQALNEAFNDKSWETVRIPHD
WAIKGPFDGNNDLQKVQIVQNGEQEATMKAGRTGGLPFIGAGWYRLSFSVPEFRAGKKAV
LLFDGAMSNAVVYVNGKKVGNWPYGYNSFSFDITSFLHTKAQNTLAVRLENFEQASRWYP
GAGLYRNVHLIVTNDTHVPVWGTYLTTPTITQENAAVQLLTTIDRSNKQSTLSVKTRLLD
AAGKVVATAVTPLKADSSTVTQQFSIAHPVLWSPETPVMYKAVTQVYEGTQLKDQYETPF
GIRTIEYKAGKGFLLNGQPRKFRGVCNHHDLGPLGAAINTAALRRQIRLLKDMGCDAIRT
SHNMPAPELVTLCDEMGIMLMVESFDEWKAPKVKNGYSFYFDDWVEKDLLNMLHHYRNNP
SNIMWSIGNEVPDQSSANGKDIARRLQDICHREDPTRPVTAGMDRFDDAINKGFAAVLDI
PGFNYKPARYPEAHSKLPQGFLMGSETASTVSSRGIYKFPVGFYKGKMYDDNQCSSYDFE
VCSWSQVPDDEFVQQEDLGYTMGEFVWTGFDYLGEPTPYDSKWPSHSSYFGIFDLAGIPK
DRFYLYRSHWNKQQPTLHLLPHWTWPGREGQVTPVFCYTSYPSAELFVNGKSMGKLSKDT
STHQSRYRLMWNDVVYQPGTIRVVAYDNTGKAVAEDSVSTAGTPHHIQLEADNNVLTADG
KDLSYITASVVDAKGNLCPAATNLLQFEITGAGSFKAVANGDPTCLEAFHLPQMKAFSGK
LVFIVQSGEKTGVVKALVKSDGLQSASCTIHVK

NT seq 2442 nt +upstreamnt +downstreamnt
atgaacaagtgtaaaatagcattactggcaatggtactcatgagtgtaaaagggatgtcc
caggcacgtcaggaatacctattggagaagaactggaagtttgccaaaggcgagcatccg
caggccttaaatgaggcgtttaatgataaaagctgggagacagtccgcataccgcacgat
tgggctataaaaggcccgtttgacggcaataacgatttacaaaaagtacagatcgtacag
aacggtgaacaggaagcaacaatgaaggcaggccgtacaggtggtctgccgttcattggc
gcgggctggtaccgtttgtccttctccgtcccggaattccgcgcaggcaaaaaggcggtc
cttctttttgacggcgccatgagcaacgcagtagtatatgttaatggtaaaaaagtgggt
aactggccctatggctataactccttctcttttgacattacctccttcctgcatacaaaa
gcgcagaacacactcgccgtacggctggaaaacttcgaacaggcttcccgctggtatccc
ggcgcaggactgtaccgcaacgtacacctgatcgtcaccaacgatacgcacgtgcctgtc
tggggtacttatctcaccaccccgacaatcacacaggaaaatgcagcagtacaactcctg
accaccatcgacagaagtaataaacaatctacactcagcgtaaagacccgtctgctcgat
gctgccggtaaagtggtagctactgccgttacgcctttaaaagcagacagcagcaccgtc
acacagcaattctccatagcgcatcccgtactatggtctccggagacccccgtcatgtac
aaagccgtcacacaggtatatgaaggaacacagctaaaagaccaatatgagacgcccttc
ggtatccgtaccatcgaatacaaggccggtaaaggtttcttgctgaatggtcagccgaga
aagttcaggggcgtttgcaatcaccatgacctcggtccgctaggcgctgctatcaacacc
gccgctttacgcagacagatccgcctgctcaaagatatgggctgcgacgcgatccgtaca
tcgcacaacatgcccgcaccagaactcgtaacactttgtgatgaaatgggcatcatgctg
atggtagagtcttttgacgaatggaaagcaccaaaagtgaagaatggttacagcttttat
ttcgatgattgggtcgaaaaggatttactgaatatgctgcatcactaccggaataatcct
tccaatatcatgtggagcatcggcaatgaagtacctgatcaaagctccgccaatgggaaa
gacatcgcacgccgcctgcaggacatctgtcaccgcgaagaccctacccgtccggtaacg
gcaggtatggaccgttttgacgatgctatcaataaaggcttcgccgctgtactcgatata
ccgggctttaattacaaacctgcccgttatccggaagcccacagtaaactcccacagggt
tttctcatgggttcagaaacggcgtctaccgtaagttccagggggatttataaattcccg
gtgggtttctacaaaggaaaaatgtacgatgacaaccaatgttcatcctatgacttcgaa
gtctgctcctggtcacaggtgcctgatgacgaattcgtacaacaggaagacctcggctac
accatgggtgaattcgtatggaccggtttcgactatctcggcgaacctaccccctatgat
tccaaatggccttcgcacagctcctatttcggcatcttcgacctggcaggtattccaaaa
gaccgtttctacctgtatagaagtcactggaacaaacaacaacccactttacacctcctg
cctcactggacatggccaggcagagaaggacaggtcacacctgtattctgctataccagt
tatccttcagcagaactctttgtcaatgggaaaagcatgggaaaattaagcaaagacact
tccacgcaccaaagccgctaccgcctgatgtggaatgacgtggtctatcagccaggtacc
atccgtgtagtggcttatgataataccggtaaagccgttgcagaagacagcgtatcgaca
gccggcacaccacatcatatccagctggaagcggacaataacgtgttaaccgccgatggg
aaagacctgtcttatattacagctagtgtagtagatgcaaaagggaatctttgtcctgcc
gccacaaacttattgcagtttgaaataacaggtgcaggtagctttaaagcagttgccaat
ggcgatcctacctgcctggaagcctttcatttaccgcagatgaaagcatttagtggtaaa
ctcgtatttattgttcaatcgggagaaaaaacaggcgttgtaaaagcgcttgtaaaatca
gatggcttgcaatctgccagttgtacaatacatgttaaataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-CPI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (36)   

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