KEGG   Chrysemys picta (western painted turtle): 101952822
Entry
101952822         CDS       T04662                                 
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X2
  KO
K10654  tripartite motif-containing protein 55
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101952822 (TRIM55)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cpic04121]
    101952822 (TRIM55)
Ubiquitin system [BR:cpic04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    101952822 (TRIM55)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-B_box zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 zf-RING_6 DNA_topoisoIV Sina_RING Cbl_N UvrD_C
Other DBs
NCBI-GeneID: 101952822
NCBI-ProteinID: XP_008171442
Position
2:complement(159171072..159301598)
AA seq 536 aa
MSTSLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRPERKSE
QPMCEEHEDEKINIYCLNCETPTCSMCKVFGAHKDCQVAPLKNVYQRQKSELSDGIAVLV
GSNDRVQGIVGQLEETCRTVEECCRRQKEQLCEKFDYLYAILEERKNEMTQIITRNQEEK
LEHVRSLMKKYADHLETVSKLVESGIQFMEEPEMAVFLQNVKALLQKITEASNAFQMEKI
EPGYENMSHFTVNLNREEKIIREIDFYREEEGDEEDEVMEGEEFDEVRTESSGEEEEVAE
KVSQLDSEPKSTTGGPQTESAPSLPPAASVSQGEVVPSGARQTAESETQMPSTAEIIDPL
FYPSWYKAKSRQASGPSLTQLSDGLGQVGPSVSLEMNVKKAETTEAATSNECEPGSGKEI
STTAATSQNCYKELGPHPARHTQELAFCISVLAFLIILHHLWSQIQYMIFTLMDWV
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgagcacttctctgaattacaagtccttttccaaagagcagcaaaccatggataacctg
gagaaacaacttatttgtcccatctgtttagagatgtttactaaacctgtggtcatcctt
ccctgtcagcataacctgtgtagaaaatgtgccagcgatattttccaggcctctaaccca
tatctgccaaccagaggaggcaccactatggcatcaggtggtcgatttcgctgtccctcc
tgcagacatgaagtagttctggacagacatggtgtgtatggacttcaaaggaacctatta
gtggaaaatatcattgacatatacaagcaggagtccaccagacctgaaagaaaatctgag
cagccaatgtgtgaagagcatgaggatgagaaaattaatatctattgtttaaactgtgaa
acacccacatgttcaatgtgcaaagtttttggtgcccataaagactgccaggttgctcct
ctcaaaaacgtttatcagcgacaaaagtctgaactcagtgatggcattgcagtgcttgtg
ggcagtaatgacagagtgcaaggaatagtaggtcaactggaggagacctgcaggacagta
gaggaatgctgcagaagacaaaaagagcaactgtgtgaaaaatttgattatctgtatgca
atactggaagaaaggaaaaatgagatgacacaaataatcactagaaaccaagaggagaaa
ctggaacatgtccgctccctgatgaaaaagtatgcagatcacttggagacagtgtctaag
ctagttgaatcaggaatccagttcatggaagagccagaaatggcagtgtttttgcagaat
gtcaaagcattgctacaaaaaattactgaagcatctaacgcatttcagatggaaaaaata
gagcctggctatgaaaatatgagccatttcacagtcaacctcaatagagaagaaaagata
ataagagaaattgacttttacagagaggaggagggtgatgaggaagatgaggtgatggaa
ggtgaagagtttgatgaagtccgcacagagtcatctggtgaggaggaagaggtagctgag
aaagtatctcagctagactcagaacccaagagcacaacaggaggccctcagactgaatca
gccccatcattaccaccagctgcctcagttagtcagggtgaggttgtgccaagtggtgct
cgacagactgcggagtctgaaacacaaatgccatcaacagcagaaatcatcgatcccttg
ttttaccctagttggtataaggccaaatcacggcaagcaagcggcccaagtttgacccaa
ctgagtgatgggttgggccaagtagggccatccgtttctctggaaatgaatgtaaagaag
gcagaaactacagaagcagcaacaagcaatgagtgtgaacctgggagtggtaaggaaatt
agcacaactgcagctacttcccagaactgttacaaagaattagggccgcatcctgcacgc
cacactcaggagttagcattctgcatatcagttttggcttttcttatcatactgcatcat
ctctggagtcagattcaatacatgatttttactttaatggactgggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (13)   
   Pfam (13)   
All databases (47)   

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