KEGG   Chryseobacterium piperi: CJF12_16890
Entry
CJF12_16890       CDS       T05071                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
cpip  Chryseobacterium piperi
Pathway
cpip03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CJF12_16890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpip03400]
    CJF12_16890
Enzymes [BR:cpip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CJF12_16890
DNA repair and recombination proteins [BR:cpip03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CJF12_16890
    RecFOR pathway proteins
     CJF12_16890
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 AAA_3 AAA_16 Mg_chelatase TIP49 AAA_14 nSTAND3 NTPase_1 NB-ARC AAA_PrkA TsaE Rad17 RNA_helicase Sigma54_activ_2 AAA_18 AAA_33 Bac_DnaA MCM AAA_24 NACHT Parvo_NS1 AAA_28 AAA_17 ABC_tran AAA_19 IstB_IS21 bpMoxR DUF815 AAA_7
Other DBs
NCBI-ProteinID: ASW75792
UniProt: A0A086BLX9
Position
complement(3835454..3836476)
AA seq 340 aa
MPDFLHPDKENYSHEELMQEEQIRPQSFKDFAGQRKTLENLEVFVTAAKKRGGALDHVLL
HGPPGLGKTTLANIIANELDVNCKITSGPVLDKPGSLAGLLTNLEENDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMLETGPNARSVQIGLNPFTLVGATTRSGMLTKPMLARFGIQSR
LEYYTIELLSMIIIRSSRVLGVKIYEDAAIEIARRSRGTPRIANALLRRVRDFAEIKGNG
EIEINITKYALNSLNVDEFGLDEMDNKIMRVMIENFKGKPVGISALATSIGENPETLEEV
YEPFLIQEGFIIRTPRGREVTDKAYKHLNIAVPRNPGELF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcctgattttttacatccagataaagaaaattattcccatgaagagctcatgcaggaa
gaacaaattcgtccccagagttttaaagattttgcaggacaaagaaaaactctggaaaac
cttgaggtttttgtaaccgctgccaaaaaacgtgggggggcgcttgaccatgttcttctt
catggcccgccgggattaggaaaaacgactttagccaatattatagccaacgaattagat
gtaaactgcaaaataacatcaggtccggttttagataaacccggaagtttagcaggttta
ttaaccaacctggaagaaaatgatgttctttttattgatgaaattcaccgtctttcccct
gttgtagaggaatacttgtattctgccatggaagattataagatcgacattatgctggaa
acaggcccgaatgcacgaagtgttcaaattggtctaaatccgtttacattagtaggagcg
acaaccagaagtggaatgcttacaaaacctatgttggcaaggtttggaatccaaagcaga
ttagaatattacacgattgaactgctttccatgatcattatcagaagttcaagggtatta
ggagttaagatttatgaagatgctgctatcgagatagcaagaagaagtcgtggaacacca
aggattgcgaatgctttattacgaagagtccgggattttgctgaaataaaaggaaatggc
gaaattgaaattaatattacaaagtatgctctaaactctttaaatgtagatgagtttggg
ctggatgaaatggacaataaaatcatgcgtgtcatgattgaaaacttcaaaggaaaacct
gtgggcatatctgcattagctacatccattggcgaaaaccctgaaaccctggaggaagtc
tacgaaccttttttgattcaggaagggtttatcattcgtactcccagaggaagagaggtt
acggacaaggcttataagcatttgaatattgcagtgccaagaaatccgggagaactcttt
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (34)   
   Pfam (34)   
All databases (44)   

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