KEGG   Corynebacterium pseudotuberculosis 3/99-5: Cp3995_0550
Entry
Cp3995_0550       CDS       T01689                                 
Symbol
uvrD
Name
(GenBank) DNA helicase, UvrD/REP type
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cpl  Corynebacterium pseudotuberculosis 3/99-5
Pathway
cpl03420  Nucleotide excision repair
cpl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cp3995_0550 (uvrD)
   03430 Mismatch repair
    Cp3995_0550 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpl03400]
    Cp3995_0550 (uvrD)
Enzymes [BR:cpl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Cp3995_0550 (uvrD)
DNA repair and recombination proteins [BR:cpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cp3995_0550 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     Cp3995_0550 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30 DEAD
Other DBs
NCBI-ProteinID: AEX39019
Position
559991..563215
AA seq 1074 aa
MIDPIELSRLLKQKFPPTPQQAAVIGAELEPMLVVAGAGAGKTETMAARVVWLVANNIAN
PDRILGLTFTRKAAQQLSQRIRGRLEQLAGMDALRDIDPSGELSYKLEAIAPTVSTYDSY
AGSLIREYGLLLPVEPTSRLITETELFQIAYDIVINYSGSLDTQTQPVNATEKLLSLVSE
IDNHIVSPQDIVEETDAFLSVLDDVEAASKRGLNQILIGWKQRQIIRKQMLPMVAMLKQH
LAYNNLMTFGEQMSLAARLAEENPQVGASQRDRYSVVLLDEYQDTGHAQRVLLRSLFSGA
AVTAVGDPMQSIYGWRGATSANLERFREDFALGEEPAQKRELTVSFRNPPEVLQLANEVS
REVLGAPDNPRRTVQPLSSREGAPHGEVTLGFFPSAEKEREFVADQLAEAYKNRGESFTA
AVLVRKKRHSAPIALELQSRGVPVEIVGLSGLIDIPEVADLIAIAAMLIRPQDTKSALRI
LAGPHVGLGAADILALADRAANLAGRGKAEREEKKTDPLERLEQIIAETLPKAPESVVGL
AEAVADLDVPREEGAATRYSDEGLRRLQLLASELRYLRTHSLGHSLPDLFADIERVFGIR
TEVLQREDPHSDGAPGTVHLDRFAEVVSDFARVPNATLSQFLDYLELSRSQGDGLEPGEV
QVRSDRVQILTVHKAKGLEWQIVSVMHADSSTYKTTTSTWLSNESAVPSALRGDAREDDS
LVGAPVWYIDSAESPADLKKQGEAHIAEFRAVEEEENARLFYVALTRAEERVLVTASTDI
TKASPPGPYAHLDMLRTKFPDCVVEWFDGESDDALEPPLPEIGVFPQELRPEGADAVKAA
MVDLPELIEDGELFERWEQEVTALIEEHHQLSTPVVPVELGLELTASDIVNLSQDPQAFA
RRRRRPVPFKPNSYAKRGTAFHQWLENRFGATALLDADELPGIDDALDGTELETLKARFL
DSEWADRTPEYVEHPFEVSIGEHIVRGRMDAVFRDADGRWIVVDWKTGQPPTEAAERRSV
SLQLAVYRLAWARLQGVDPSEVQALFHYVGRNFSYRPSELPDEASLARMLALNV
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgatagatccgatcgaactatcgcgattgctcaagcagaaattccctcctacgccgcag
caagcggcagtcataggagctgagctcgaacctatgctggtagtagctggcgccggtgca
ggaaaaacagaaaccatggccgcccgcgtggtatggctggtggctaataacatagcgaat
cctgatcgcatcctgggcctgacgtttaccagaaaagctgcgcaacagctctctcaacgc
atccgaggccggcttgagcaactcgcgggtatggatgcactgagggacatcgacccgagt
ggggagctgtcttataaactagaggctatcgctccgacagtctccacgtacgattcctat
gccggcagcctgatccgagaatatggtttgttattaccggtggaacccacctcacggtta
attacagaaaccgagctttttcagattgcgtatgacatcgttattaactattcagggagc
ttagatacacagacgcaacctgttaacgcgacagagaagctcttgtctttagtctctgaa
atagacaaccatattgtttcgccgcaggacattgtggaagagacagacgcatttttatcg
gtgctagatgacgtagaggcggcgtctaagcgcgggctaaatcagatccttatcgggtgg
aagcagcgtcagataatccggaaacaaatgttgcccatggtcgcgatgctcaagcagcac
ttggcctacaataatcttatgaccttcggcgaacagatgtcgcttgccgccagactcgcc
gaggaaaatccgcaggtaggagcatctcagagggatcggtattccgtggtattgctggat
gaataccaggacaccgggcacgcgcaacgggtgttgttacgcagcctctttagcggcgcc
gcagtcaccgcggtgggcgatccgatgcaatcaatttacggatggcgtggtgctacctct
gccaacctcgagcgttttagagaggactttgcactaggggaagaacctgcgcaaaaacgc
gagttaacggtgagcttccgtaatccccccgaggtccttcagctggccaacgaggtatct
cgggaagtcctgggagccccggacaaccctcgtagaacagtgcaaccgctctcttcccgt
gaaggagcaccgcacggggaagtaacactgggatttttccctagcgcagaaaaagagcgc
gaatttgtagccgatcaattggcagaggcttataaaaatcggggagagagttttaccgct
gctgttctagtgcgaaagaaacggcactctgctcccatcgcgttagaattgcaatcgcgg
ggagttcccgtggaaattgttggtttatctggtcttatagacatccccgaggtcgccgat
ctgattgcgatcgcagcgatgttgattcggcctcaagacacaaaatctgcgctacgaatt
ttagcgggtccgcatgtggggctgggcgcagcagatattctggcattagctgaccgtgcg
gctaacctcgcaggacgcggaaaagctgagcgggaagagaaaaagacagatccgcttgag
cgcctggaacagataatcgctgaaaccctgcccaaggcaccagaatcggtcgtgggattg
gcagaggctgttgcagatcttgatgtaccacgggaagaaggggccgcaactcgttatagc
gacgaggggttgcgcaggctgcaattgctggcatctgagcttagatatctgcgtacgcac
agtttgggccactcattgccagatctttttgcagatattgagcgagtatttgggatccgc
accgaagtattgcagcgagaagatccacactcggacggtgctccaggcacggtacatcta
gatcgttttgctgaagttgtctcggattttgcgcgggttccaaatgcaacgctgagccag
tttttagattatcttgagctgagtagaagccagggagatggcttggagcctggagaagtg
caggttcgttctgaccgcgttcagatcctcactgtgcataaagctaaaggtctggaatgg
cagatcgtgagcgttatgcacgcagactccagcacctataagacaacaacgtcgacatgg
cttagcaacgagtctgcggtgccatcggcgcttcgaggagatgcccgagaagacgattct
ttagtgggagctcccgtttggtacatcgattctgcagaatcgccagctgatctgaaaaaa
caaggagaggctcacatcgcggaatttagggctgtggaagaggaagagaacgcccggtta
ttttatgtggctttgacccgtgcagaggagcgtgttctggttactgcgtcgactgacatc
accaaggcttcgcccccaggaccttatgcgcatcttgatatgctacgcactaaatttcca
gattgcgtggtggaatggttcgacggcgagagcgatgatgcccttgagccgcctcttcca
gagatcggagtttttccgcaagaattgcgccctgagggggcagacgccgtaaaagctgcc
atggtagatcttcctgagctgatagaagatggcgagctcttcgagcgatgggaacaagag
gtaactgcgctcatcgaggaacaccatcagttgagtaccccggttgtccccgtcgagttg
ggccttgagcttacggcctcggacatcgtgaatctttcacaggacccccaagcttttgct
cgaaggcgacgccgcccagttcctttcaaacccaatagctatgccaagcgcggaactgcc
ttccaccagtggcttgaaaaccgttttggcgccacagccctactggacgctgatgagctc
cctggtatcgatgatgcgctggatggaacagaactagagactttgaaagctcgctttttg
gacagcgagtgggcggaccggacccccgaatatgtggagcatccgtttgaggtttctatt
ggcgagcatatagtgcgaggccgcatggacgctgtgtttagggacgcagatggcagatgg
attgttgttgattggaagacgggacaaccccccacggaggctgcggagcgccgctctgta
tcgctgcagctggcggtataccgactagcgtgggcccggttgcagggagtcgacccatca
gaggtacaagcactattccattatgtggggcgcaactttagctatcggcccagcgagctt
ccggatgaggcgtcgttagctcgaatgctggcgttgaacgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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