KEGG T00379: CPR

Clostridium perfringens SM101: CPR_0815

Entry

CPR_0815 CDS T00379

Definition

beta-galactosidase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

cpr Clostridium perfringens SM101

Pathway

cpr00052	Galactose metabolism
cpr00511	Other glycan degradation
cpr00600	Sphingolipid metabolism
cpr01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:cpr00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:cpr00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cpr00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Glyco_hydro_2_N Glyco_hydro_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

JCVI-Pathema:

UniProt:

Position

941279..943693

AA seq 804 aa
MRKIIHINDQWFYANDYKGEYLKNEFDFSNFERVDLPHTNIELPYNYFDEKSYQFVSTYV
KTLKFDNSVKGKKVFLDFEGVMIAAEVYLNGIHVGGHKGGYTNFSIDITDALKINEDNIL
KVVVDSTERPDIPPHGYVVDYLTYGGIYREVSLRVVEPIFINNLYARAYDCLKEEKRLEL
YIEINNFEKYRDDLEIVVDFGDDTFEETLSTKLPIEEGTSIKNIEIDQLNMVKLWDIENP
KLYEIKVKLLKGSEVIDEYKDNFGFREAEFRSDGFYLNGRRVKLVGLNRHQAYPYVGYAM
PQRVQEKDAEILKYELGLNIVRTSHYPQSVHFLRKCDEIGLLVFEEIPGWQHIGDEAWQA
ESIKNVEEMIKKDYNRPSIVLWGVRINESQDSHDFYVKTNAMAKSLDPIRQTGGVRYLEN
SDFLEDVYTMNDFIHSGGEKVLRTQSEVTGQVDKVPYLVTEYNGHMYPTKSFDQECKKVE
HAYRHLRVINESFGLDEISGAIGWCAFDYNTHSSFGSGDKICYHGVSDMFRNPKYAAYSY
ASQKKVEDGVVLEPITLGAKGERDGGAILPFTVLTNCDYIKIFKDGIYIDTYYPNKEKFP
NLPHPPIEVSHILSMDSEIPLTEEAKKEIKDFVLNKLKDSNLTNLAEEDFKYIEEFSERV
NIPVFKIMSLVYKLAGGWGDKENSLIIKGFIDNKEVASKEIGELRSMNKLEVTPDNLELS
LDKTSYDATRIVVKLLDNLGEVLFLNNDFIEVEIDGPLSIMGPSKFGISGGAVAFWVRTQ
GKTGLCKIKVKSMYFEEEISIEVK

NT seq 2415 nt +upstreamnt +downstreamnt
atgaggaaaataattcatatcaatgatcaatggttttatgcaaatgattacaaaggtgag
tatttaaaaaatgagtttgattttagtaattttgaaagggtagatttacctcatacaaat
atagagttaccatataattattttgatgagaaatcatatcaatttgtttctacttatgtt
aaaactttaaaatttgataatagtgttaaagggaaaaaggtatttttagattttgaagga
gttatgatagccgcagaagtatatttaaatggaattcatgttggtggacataagggtggt
tacactaatttttcaatagatattactgatgctttaaaaattaatgaagataatatatta
aaggttgttgttgactcaacagaaagaccggatatacctcctcatggatatgttgttgat
tatttaacctatggaggaatatatagagaagtttccttaagagtagttgaacctatattt
ataaataatttatatgcaagggcatatgattgtttaaaggaagaaaaaagattagaactt
tatatagaaataaataattttgaaaaatatagagatgatttagaaattgttgtagacttt
ggtgatgatacttttgaagaaactttaagtacaaagttaccaattgaagaaggaacaagt
attaaaaatatagaaatagaccaattaaatatggttaagttatgggatatagaaaatcct
aagctttatgaaataaaagttaagttattaaaaggttcagaagttatagatgaatataaa
gataattttggatttagagaggctgaatttagatcagatggtttctatttaaatggaaga
agagttaaacttgttggattaaatcgtcatcaggcttatccatatgtaggatatgctatg
cctcaaagagttcaagaaaaggatgctgagattttaaaatatgaattaggactcaacata
gttagaacatctcactatccgcaatcagtacacttcttaagaaaatgtgatgagattgga
ctattagtttttgaagagatacctggttggcaacatataggtgatgaagcttggcaagca
gaatctattaaaaatgtagaggaaatgataaaaaaagattacaatagaccttccatagtt
ttatggggcgttagaataaatgagtctcaagatagtcatgatttttatgtgaaaactaat
gctatggcaaagagtttagatcctattagacaaactggtggggttagatacttagaaaat
agtgatttcctagaagatgtttataccatgaatgattttatacacagtgggggagaaaaa
gtattaagaactcaaagtgaagtaacaggacaagtagataaagttccttatttagtaact
gagtataatgggcatatgtatccaacaaaaagctttgatcaagaatgtaaaaaagttgaa
catgcttatagacatttgagagttattaatgaatcctttggcttagatgaaataagtgga
gccataggatggtgtgcttttgattataatacacatagttcctttggttcaggagataaa
atttgttaccatggagtttctgatatgttcagaaatcctaagtatgcagcttattcctat
gctagccaaaagaaagtagaagatggtgtggttttagaacctattactttaggggctaag
ggagaaagggatggaggagcaatacttccatttacagttcttacaaactgtgattatata
aaaatatttaaagatggaatatatatagatacttattatcctaataaagaaaagttccct
aatttaccacatccaccaatagaggtttcacatattttatctatggattcagaaatacct
cttactgaagaagcaaaaaaagaaattaaagactttgtattaaataaattaaaagattct
aatttaactaatttagctgaagaagattttaaatatattgaagaatttagtgaaagagta
aatatacctgtatttaaaataatgtctttagtttataaattagctggaggttggggagat
aaggaaaactccttaataataaaaggctttatagataataaagaggttgcttctaaagaa
ataggtgaacttagaagcatgaataaacttgaagttacaccagataatttagaactttca
ttagataaaacaagttatgatgctactagaatcgtggttaaacttttagataatttagga
gaggttcttttcttaaataatgattttattgaagtagaaatagatggacctttaagtata
atgggaccaagtaagtttggaatttctggtggagcagtcgctttctgggtaagaactcaa
ggaaaaactgggctttgcaaaataaaggttaagagcatgtactttgaagaagaaatttct
atagaagttaagtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   JCVI-PATHEMA-CPR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

Download RDF

DBGET integrated database retrieval system