KEGG   Colwellia psychrerythraea: CPS_0739
Entry
CPS_0739          CDS       T00258                                 
Symbol
holC
Name
(RefSeq) DNA polymerase III, chi subunit
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
cps  Colwellia psychrerythraea
Pathway
cps03030  DNA replication
cps03430  Mismatch repair
cps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CPS_0739 (holC)
   03430 Mismatch repair
    CPS_0739 (holC)
   03440 Homologous recombination
    CPS_0739 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cps03032]
    CPS_0739 (holC)
   03400 DNA repair and recombination proteins [BR:cps03400]
    CPS_0739 (holC)
Enzymes [BR:cps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CPS_0739 (holC)
DNA replication proteins [BR:cps03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CPS_0739 (holC)
DNA repair and recombination proteins [BR:cps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CPS_0739 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AAZ26587
UniProt: Q488M5
Position
complement(741391..741864)
AA seq 157 aa
MMQTQVMFYLLKDDVTDEKEEDTRSAIYHACLQASHFYRQNQRVYIYAKDQQHAEQIDEM
LWAFDSDSFVPHNLVGEGPKQGAMVEIGYQAPQGRRPVLINLNSAVPNFANQFQFIVDFV
PSDETLKQQARERFKTCRQWGFQVDNQAVTVPEEVSK
NT seq 474 nt   +upstreamnt  +downstreamnt
atgatgcaaactcaagtaatgttttatctacttaaggatgatgtaacagacgagaaagaa
gaagatactcgttctgctatttatcatgcctgtttgcaagccagtcatttctatcgtcaa
aatcagcgggtctatatttatgcaaaagaccagcaacatgctgaacaaattgatgagatg
ctttgggcatttgatagcgacagttttgtaccccataacctcgttggtgaaggtccaaaa
caaggcgctatggtggaaataggttatcaagcaccgcaaggacgtcgtcctgtgcttatt
aaccttaatagtgcggtgcctaactttgccaatcaatttcaatttatcgttgattttgtg
cctagtgatgaaacacttaaacaacaagcgagagaacgctttaaaacttgccgacaatgg
ggttttcaagttgataaccaagcggtaaccgtgccagaggaagtcagtaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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