KEGG T00258: CPS

Colwellia psychrerythraea: CPS_1025

Entry

CPS_1025 CDS T00258

Definition

beta-hexosaminidase (EC:3.2.1.52)

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

cps Colwellia psychrerythraea

Pathway

cps00511	Other glycan degradation
cps00520	Amino sugar and nucleotide sugar metabolism
cps01100	Metabolic pathways
cps01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:cps00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:cps00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 CHB_HEX Glyco_hydro_20b CHB_HEX_C CHB_HEX_C_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

1050261..1052900

AA seq 879 aa
MNKIKWAFTIAASLSLLGCEKYPEPAVDTGEKINLQAIYSVTQSDIDNIAQNLEVNYRVV
TNIPTDKCDSKIADGACFEVELSFTAKKAIAAKDWTIHFSQISPIQSFESEDFTVKHLNG
DLHVIALQDKFSGFSAAETKKITFRAMFWSLSETDALPNYIVSAPGLDARVIESTVPYID
KDTGLEILPYVEPFTDEKTQFKRTASDKTQWLTSEKLYQRNSVLVEDKLAVIQAIIPTPK
SVTLDANDGFADISKGIAISLGNVKHHDVDAAISRLDTLGVKQNSVGLPLHLSIVSNNDK
VIGSYSLTVTEKEISIVGVDGNGVFNGLQSLASLVTVGESRLPMIVVDDEPHFTFRGMLV
DVARNFHSKEFILKLLDQMAAYKLNKLHLHLGDDEGWRLEIPSLPELTNIGAKRCFDVAE
ENCLISQLGAGVDENSSVSGYYSVSDYHEILQAATARHIQVIPSLDMPGHSRASIKAMTA
RYKKFMALEDEAKAKQFLLEDFEDNTQYSSVQFYSDNTINACLESSYDFVIEVMTQVKKI
HADAGQPLTRYHIGADETAGAWLESPACKAFVANNDQGVTEMGELGAYFIERVAGILSDL
DIETAGWSDGMEHTRVDNMPAIVQANAWDTLAWGGHEKVHRLANRDWQVVISSPDVLYFD
FPHEADPKEHGYYWASRHTNTEKVFQFMPDNLPVHAEFWLDREDNAYVADDTKAALAPGK
KFLGIQGQLWSENVRTDDMVEHKVFPRLLALAERAWHLADWAVPYNYQGAKYSQQSNSFS
DKSKAMRDSQWALFANTLGQKEFTKLELAQIDYRLPTVGAIIQAGKLHANIAFPGLAIEY
RVNGGNWLTYQNPTAVSGEVSIRSRSTNGLRTSRITKIK

NT seq 2640 nt +upstreamnt +downstreamnt
atgaataaaataaagtgggcgtttacaattgccgctagtttatctttactcggttgtgaa
aaatatcctgagccagcagttgatacgggggagaaaatcaacctacaggcaatttactcc
gttacccagagtgatatagataacatagcccagaatttagaggttaattatcgagtggtt
accaatattcctacggataaatgtgacagtaaaattgctgatggtgcatgctttgaagtg
gagttaagttttactgcgaagaaagcaattgcagctaaagattggactattcattttagc
caaatctcacctatccagtcttttgaaagtgaagatttcaccgtaaaacacctaaacggt
gacttacatgttattgctttacaggacaaattttctggattttctgcagcagaaactaaa
aaaataacgtttcgtgctatgttttggtcactgagtgagactgacgctttacctaactat
attgtcagtgcacctggtttagatgctcgtgttattgaaagtacagtaccctatattgat
aaagatacgggactagaaatattaccctatgttgaaccttttactgatgaaaaaacgcaa
tttaagcgcacagcctcagataagactcaatggttaactagtgaaaaactttatcaacgt
aattctgtactggtagaagataagttagcagttattcaagcaattattccaacacctaaa
tcagtcactctcgatgccaatgatggctttgcagatataagtaaaggcattgcaatctct
cttggcaatgtaaaacaccatgatgtggatgcagcgatatcgcgtttagacaccttgggt
gttaaacagaactctgtcggtttgccactgcatttaagtattgtgagtaataacgataaa
gttattggcagttatagtttaacggtaactgagaaagaaattagcatagtgggtgtcgat
ggtaatggtgtcttcaatggcttgcaatcactagcaagcttagtgacggttggtgaatcg
cgtctacctatgatagtggttgatgatgaaccacactttacctttcgtggcatgttagtt
gatgttgctagaaattttcattctaaagagtttattctaaaactacttgaccaaatggcg
gcatacaaattaaacaaactacatttgcaccttggtgatgatgaaggttggcgcttggag
atcccaagcttgcctgaattaactaatattggcgcaaaacgttgttttgatgtggcagaa
gaaaactgtttgatctcgcagttaggcgcaggtgttgatgaaaactcatcagtaagcggc
tattacagcgtaagtgactatcatgaaattttacaagcggccactgcacgtcatattcaa
gtgatcccatcacttgatatgccaggtcactctcgtgcctcgattaaagcgatgacggcc
cgttacaaaaaattcatggccttagaagatgaagcaaaagctaaacagttcttactcgag
gattttgaagataacactcagtattcctcagtacaattttacagtgataacactattaat
gcctgcttagagtcttcttatgactttgttattgaagtgatgactcaggtgaagaaaatc
catgccgatgctggccaaccactaactcgctatcatataggcgcagatgaaacagcgggt
gcttggttagaatcaccagcttgtaaagcgtttgtcgctaataatgatcagggtgttaca
gaaatgggtgagcttggcgcttatttcattgaacgtgtggccggaatattatctgatctg
gatattgaaactgcgggttggagcgatggtatggagcacactcgtgtagataatatgccc
gctatagttcaagccaatgcttgggatacgctagcttggggaggccacgaaaaggttcac
cgattggcaaacagagattggcaagtcgttatttctagcccagatgttttatatttcgat
tttccacatgaagcagatccaaaagaacacggttattactgggcatcacgtcatactaat
acagaaaaagtctttcaatttatgcctgataatttacccgttcatgctgaattttggtta
gacagagaagataacgcctatgttgccgatgatacaaaagcagccctagcaccggggaaa
aaatttctaggtattcagggacagttatggagtgaaaatgttcgtactgatgatatggtt
gaacataaagtttttccacgtttattagctcttgcagaacgtgcatggcatcttgctgat
tgggctgtaccttataattaccaaggtgcaaaatattctcaacagagtaatagcttctcc
gacaagtcaaaagccatgcgtgatagccaatgggcgttatttgcaaatactttaggacaa
aaggagtttactaaacttgagttagcacaaattgattaccgtttacctaccgtaggtgcg
attatccaagcgggtaagttgcacgccaatattgcttttccaggtcttgccatagaatat
cgagtgaatggtggaaactggcttacttatcaaaatcctactgctgtttcaggtgaagta
agtattaggagtcgaagtactaatggcttaagaacaagccgtattacgaaaataaagtaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF

DBGET integrated database retrieval system