KEGG   Colwellia psychrerythraea: CPS_2014
Entry
CPS_2014          CDS       T00258                                 
Symbol
sbcB
Name
(RefSeq) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
cps  Colwellia psychrerythraea
Pathway
cps03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CPS_2014 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cps03400]
    CPS_2014 (sbcB)
Enzymes [BR:cps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     CPS_2014 (sbcB)
DNA repair and recombination proteins [BR:cps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CPS_2014 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CPS_2014 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CPS_2014 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AAZ26695
UniProt: Q483M2
Position
complement(2086576..2088039)
AA seq 487 aa
MQDRTSQNNTEQPSILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEPEMFYCTPPVD
YLPHPEACLVTGITPQKAQREGLSEAEFAARIHTLFTQPNTCVAGYNSIRFDDEVTRYLL
YRNFYDPYAREWQNGNSRWDIIDMVRACYALRPEGINWPTVKRDGEEVISFRLELLTAAN
DISHEAAHDAMSDVYATIAMAKLIKEKQPKLYDFIFNLKNKNQVKDLINTAEMTPIVHTS
SKVSSAHGCTSWFAPVSYHPVNKNAVICVDLARDISPLLTLSSEEIKARLYTRYDDLAPD
ELPIPVKLIHVNKCPVIAPAKTLLPENAERLAIPRDVCLDNLALLRKHAELRDKLSDVFA
TSDFDNDDVDAEQALYGGSFFSHSDKAQMDILRGLSPEQLANHPFQFQDERLSVLLFRYR
ARNYPYTLSTEEQQKWQQYCQNKLQYGGKGILSLDEFMMKIENLAHEHETDKAKMSVLKA
LYEFLQG
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgcaagacagaacatctcagaacaacacagaacaaccatcaatcctttggcacgattat
gaaacttggggaataaacccaaaatttgataaaccgtctcaattcgccggcattcgtact
gatctcgatttaaatatcattggcgagcctgaaatgttttattgcacgccgcccgttgat
tacttaccacatcctgaagcctgtttagttacaggtatcacgccacaaaaagcgcaacgt
gaaggcttgtctgaggctgaatttgctgcacgtattcatactttatttactcagcccaat
acctgtgttgctggctataacagtattcgctttgatgatgaggtgactcgttatctgctt
tatcgtaacttttatgacccttatgcacgtgaatggcaaaatggaaatagtcgctgggat
attatagatatggttcgtgcttgttatgcacttcgtcctgaaggcattaattggccaacc
gttaagcgcgatggtgaagaagtcatcagtttccgtttagagctattaacggcagcaaat
gacatcagtcatgaagcggcccatgatgcgatgagtgatgtttacgccaccatagcaatg
gctaaattgatcaaagaaaaacaaccaaaactttatgattttatctttaacttgaagaat
aaaaatcaagtgaaagatttgatcaataccgcagagatgacacctattgtgcatacttcg
agcaaagtatcatcagctcatggctgcaccagttggtttgcgccagtaagttaccaccca
gttaataaaaacgcggtgatctgtgtcgatttagcacgagatatatcacctttattaacg
cttagcagtgaagagattaaagcgcgtttatatacccgttatgacgatttagcgccagat
gaactaccaattccagtaaaacttattcatgtcaataaatgccctgttatagcgccagct
aaaacgttactaccagaaaacgcagagcgcttagcaataccgcgcgatgtttgcttagat
aatttagctctattgagaaagcatgctgaactaagagataaattaagcgatgtttttgcc
acatcagactttgataatgatgacgtagatgcagagcaagcgttatatggtggcagtttc
tttagtcatagtgataaagcgcaaatggatattttacgtggtctatcacctgagcaacta
gctaatcatccatttcaatttcaagatgagcgtttaagtgtattactgtttcgctatcga
gcaagaaactacccgtacacgctatctacagaagaacaacagaaatggcagcagtattgt
cagaacaaactgcaatatggcgggaaaggtattttatcacttgatgagttcatgatgaag
attgaaaatctagcccatgagcatgaaactgataaagcaaaaatgtcggtattaaaagcc
ttgtatgaattcttgcaagggtaa

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