KEGG C.psychrerythraea: CPS

Colwellia psychrerythraea: CPS_4262

Entry

CPS_4262 CDS C.psychrerythraea

Gene name sfcA

Definition malate dehydrogenase (EC:1.1.1.38)

Orthology K00027 malate dehydrogenase (oxaloacetate-decarboxylating)
[EC:1.1.1.38]

Pathway cps00620 Pyruvate metabolism
cps02020 Two-component system

Class Metabolism; Carbohydrate Metabolism; Pyruvate metabolism
[PATH:cps00620]
Environmental Information Processing; Signal Transduction;
Two-component system [PATH:cps02020]

SSDB

Motif Pfam: Malic_M malic
PROSITE: MALIC_ENZYMES

Other DBs NCBI-GI: 71279383
NCBI-GeneID: 3519838
JCVI-CMR: CPS_4262
UniProt: Q47WB0

Position complement(4493556..4495244)

AA seq 562 aa
MPQSQRPLYIPYAGPSLLETPLLNKGSAFSKEERGSFNLTGLLPPRFESIDEQAERAFRQ
YSCFQTNINKHIYLRAIHDNNETLFFKLVQNNLAEMMPIIYTPTVGDACEQFSDIYRSSR
GLFISYEDRFNIDDMLRNATKNKVKVIVVTDGERILGLGDQGIGGMGIPIGKLSLYTACG
GISPAHTLPVMLDVGTNNQKLLDDPMYMGARHKRIDQDSYDEFLELFISAVKRRWPNVLL
QFEDFAQPNAMPLLQRYKDRICCFNDDIQGTASVTVGTLLAACRSKGSKLSELNVAFVGA
GSAGCGIAEQIISQMMNEGLGAEQARSQVFMVDRFGLLTQGMGELRDFQQKLVQSNEAIA
EWDIAGEFASLVEVMHGAKPDILIGVSGQAGLFTEKVITAMKSHCEMPIIFPLSNPSRQV
EATPSQVINWTQGQVIIATGSPFDPIEYQGKTFPIAQCNNSYIFPGVGLAVVAANISRIT
DGMLQVASETLAAASPLANGESDELLPPLTSIAQLSRDIAFAIAKVAYKQGLALELTDDE
LLAKIEHNFWKPEYRQYRRTSL

NT seq 1689 nt +upstreamnt +downstreamnt
atgcctcaatctcaacgcccactttacatcccttatgccggtccatcattattagaaacc
cctttactgaacaagggcagtgcttttagcaaagaagaacgcggtagttttaacctaact
gggcttttgccaccacgctttgaaagtattgatgaacaagcagagcgtgcatttcgtcag
tacagttgttttcaaactaacatcaataagcatatttatttacgtgctatccatgataat
aatgaaacgttgttttttaaattggtacaaaataatctggccgaaatgatgcctattatt
tataccccaacggttggcgatgcttgtgagcagttttctgatatttaccgcagctcacgc
ggtttgtttatctcttatgaagatagatttaatattgatgacatgctgcgtaatgcgact
aaaaataaagtaaaagtgattgtagttaccgatggtgaacgtattttgggtcttggcgat
caaggcattggcggtatgggtattccaatcggtaagctctctctttataccgcttgtggt
ggtattagcccagcgcatactttgccggtaatgcttgatgtaggtactaataaccagaaa
ctattagatgaccctatgtacatgggtgctcgacataagcgtatcgatcaagattcctat
gatgaatttttagagttatttatcagcgcagttaaacgtcgctggccaaatgttttgttg
caatttgaagatttcgcacagccaaatgcgatgcctttattgcaacgttataaagataga
atctgttgttttaatgatgatattcagggaactgcttcggtaactgttgggactttactg
gctgcttgtcgtagtaaaggctctaaactctcagagttgaatgttgcttttgttggtgca
ggctctgcaggttgtggtattgccgaacaaattatcagccagatgatgaatgaaggcctt
ggtgccgagcaagcccgtagccaagtgtttatggttgataggtttggtttgttaacgcag
ggtatgggcgaacttcgtgattttcagcaaaaactagtacaaagcaatgaagccatcgct
gagtgggatattgctggagagtttgcctcacttgttgaagtaatgcacggcgctaaacct
gatattcttattggtgtctctggccaagcgggattatttactgaaaaagttattaccgcg
atgaagtctcattgtgagatgccgataatcttcccgttaagtaatccatctcgtcaagtt
gaagcaacacctagccaagttattaattggacacaagggcaagtaattattgcaacagga
agcccgtttgatcctattgagtatcaaggaaaaacgttcccaattgctcaatgtaataat
agttacatcttccctggtgttggcttagctgttgttgcggcaaatatcagtcgaattacc
gatgggatgttacaagtggcgagtgaaaccttagctgcggcatcaccgcttgcaaatggc
gagtctgatgagttattgccaccgttaacgtctattgcacaattaagtagggatattgct
tttgctattgctaaagtagcttataaacaaggattagcattggagctaactgatgatgag
ttgttagcaaaaatagagcataatttttggaaacctgaatatcgtcaataccgtagaaca
agcttgtaa

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JCVI-CMR (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (2)   
   PROSITE (1)   
All databases (16)

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