KEGG   Chlamydia psittaci 01DC12: BN356_6791
Entry
BN356_6791        CDS       T02343                                 
Symbol
rpoB
Name
(GenBank) putative DNA-directed RNA polymerase beta chain
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
cpsd  Chlamydia psittaci 01DC12
Pathway
cpsd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:cpsd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BN356_6791 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpsd03021]
    BN356_6791 (rpoB)
   03400 DNA repair and recombination proteins [BR:cpsd03400]
    BN356_6791 (rpoB)
Enzymes [BR:cpsd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BN356_6791 (rpoB)
Transcription machinery [BR:cpsd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BN356_6791 (rpoB)
DNA repair and recombination proteins [BR:cpsd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BN356_6791 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: CCO02180
Position
complement(797771..801529)
AA seq 1252 aa
MFKCPERVSVKKKEDILDLPNLIEIQIKSYKQFLQIGKLAEERDNIGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPDECIRRGITYSVTLKVRFRLTDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVVVSQVHRSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDL
IYIHIDRKKRRRKILAITFIRALGYSSDADIIEEFFQIEEHSLKSEKDFSFLVGKILADN
VLDEASSLVYGKAGEKLSTAMLKRMLDANISTLKIAVEADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDPKRYNLGRVGRYKLNRKLGFPMDEESLAQVT
LRKEDVIGALKYLIRLKMGDEKASIDDIDHLANRRVRSVGELIQNQCRSGLARMEKIIRE
RMNLFDFSSDTLIPGKIISAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVR
DGVVTDEIEYMTADVEEECVIAQASANLDEYNMFVDPVCWARYRGEAFEADTSTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLEARAAKDSGAI
VVAEEDGVVEYVDGYKVVIAAKHNPTLKRTYDLKKFLRSNSGTCINQRPLCSVGDVVVKG
DVIADGPATDKGELALGKNILVAFMPWYGYNFEDAIIISEKLIKQDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSEEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKG
YKNQISVLKTEYREKLGALLLNEKAPASIIHRRTADILVQEGTVFDQETIELLEQESLVD
LLMPPCDMYDVLKSLLSDYETSLQRLEVNYKTEVEHIREGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIHVKTPVFEGFPESRIWDMMIEQGLPADGKSYLYDGKTGERFDNTVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVTGRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq 3759 nt   +upstreamnt  +downstreamnt
atgttcaaatgcccggagcgggttagcgtcaaaaaaaaggaagatatcttagatcttcca
aatcttattgaaattcaaattaagtcatataagcaatttcttcagattggtaagcttgca
gaagagcgcgataatatcggcttagaagaggttttcagagagatttttccaattaaatct
tataacgaagctaccattttagagtatctatcttataacttaggtgtgccgaaatattct
cccgacgagtgtatccgtcgcgggatcacctatagtgttactttaaaagttcgcttccgt
ttgactgatgaaacaggaattaaggaagaagaagtctatatgggcactatacccattatg
acagataaaggaacctttattattaacggggctgaaagggttgttgtttctcaagtacac
cgttctccagggattaatttcgaacaggaaaaacattctaaaggaaatattttgttttct
ttcagaattattccttatcgaggtagttggctagaggctatttttgatataaatgattta
atttatatccatattgatagaaagaaacgtcgccgcaagattttagctataacgtttatc
cgtgccctagggtattcatctgacgctgatattattgaagagtttttccaaatagaagaa
cattctttaaaaagtgaaaaagatttttctttcttagttggtaaaatcttagctgataat
gttttagatgaagcttcttctttggtttacggaaaggctggagaaaaacttagcacagct
atgttaaaacgtatgctcgatgctaatatctcgactttaaaaatagctgtagaggctgat
gaaaatcaccctatcatcaaaatgttggctaaagatccaacagactcttatgaagctgct
ttaaaggatttctatagaagattgcgccccggtgagcctgcgaccttggcaaatgctcgt
tctacaattatgcgtctgttctttgatcctaaacgctataacttaggaagagtaggtcgt
tataaattaaatagaaaacttggattccccatggatgaagagtccttagcacaagtgacc
ttaagaaaagaagatgttattggtgctctgaagtatcttatccgtttaaaaatgggtgat
gaaaaagcttcgattgatgatatcgaccatttagctaaccgtcgtgtacgctctgtagga
gaacttatccaaaaccaatgccgctccggattggctagaatggaaaaaattatccgagag
agaatgaatttatttgatttctcttctgatacattgattccaggaaaaattatctctgca
aaaggtctcgctagcgttctaaaggactttttcggtcgttctcagctttctcaattcatg
gatcaaacgaaccctgtggccgaattaacacataagcggcgtttgtcagctttggggcct
ggaggtttgaatagagaaagagctggatttgaagttcgtgacgtgcatgcgagccattac
ggacgtatatgtccaattgagactccagaaggaccaaacattggtttgattacttctcta
tcttcctttgcaaaaattaacgaattcggattcattgaaactccttatcgtatcgttaga
gatggggtagttactgatgaaatcgaatacatgactgctgatgtcgaagaagaatgtgtg
attgctcaggcttcagcgaatttagatgaatataatatgtttgtcgatcctgtatgctgg
gcaagatatcgtggagaggctttcgaagcagacacaagtaccgttacgcatatggacgtt
tctccaaagcaattggtatcgattgttacaggtttaattccatttttagagcatgacgat
gctaaccgtgctcttatgggatcaaacatgcaacgtcaagctgttcctttattgaaaact
gaagctcctattgttggaacaggtttagaagcacgtgctgctaaagattccggtgctatt
gttgttgctgaagaagacggagtcgtagaatatgttgacggttataaagtagttattgca
gctaaacataacccaacacttaaacgcacttacgatcttaaaaagttcttaagatcaaac
tctggtacctgcattaatcaacggcctttatgtagtgtgggagatgttgtagtcaaaggt
gatgttatagctgatggtcctgctacagataagggagaacttgctttaggaaagaacatc
ttggttgccttcatgccttggtatggatataacttcgaagatgcgattatcatttctgaa
aagttgattaagcaagacgcttatacctcaatttatattgaagagtttgaattaacagct
agagacacaaaattaggaaaagaagagattactcgtgacattcctaacgtttctgaagaa
gtcttggctaacttaggtgaagatggaattattcgtattggagctgaagtaaagcctggc
gacattcttgttggtaaaattactccaaaatcagaaacagaattagctcctgaagaacgt
ttattacgagcaatcttcggagagaaagctgctgatgttaaagacgcttctttgactgta
cctccaggaacagagggcgttgtcatggacgtgaaagtcttcagtagaaaagatagactt
tctaagagtgatgacgagcttgtagaagaagctgttcatttgaaagacctacagaaaggt
tacaagaatcagatttcggtattaaaaacagagtatcgtgaaaaattaggagccctattg
ttaaatgaaaaagctccagcttcgattatacatcgtcgtaccgccgatattctggttcaa
gaaggtactgtatttgatcaagagacaatcgaattgcttgagcaagagtctttggtcgat
ctccttatgcctccttgcgatatgtatgatgttttaaaatcactactttctgattacgag
acatccttgcaacgtttggaagtcaattataaaacagaagttgaacatattcgtgaaggt
gatgctgatcttgatcacggtgtgatccgccaggttaaggtatatgttgcttcaaaaaga
aagctgcaggttggagataaaatggctggacgtcacggaaacaaaggagttgtttctaag
attgttcctgaagctgatatgccataccttgctaacggcgaaactgtacagatgatctta
aacccccttggtgtgccttctaggatgaacttaggtcaggtattggaaactcatcttggt
tacgctgcaaaaactgccggtattcatgtaaaaactccagtatttgaaggtttcccagaa
tctcgtatctgggacatgatgatagaacaaggtttgcctgcagatggtaagtcttacttg
tatgatggaaagactggagagagattcgacaatactgtggtaatcggatacatttacatg
ttgaagctaagccacttaattgcagataaaattcacgccagatccattggtccttactcc
ttggtcactcagcaacctctcggaggtaaagctcaaatgggaggtcaaagattcggagag
atggaagtttgggctttagaagcttatggggtagctcatatgctccaagagattcttaca
gttaaatcggatgacgttactggtcgaacaaggatttatgaatccattgttaaaggagaa
aacctcctgaagtcaggaacgccagagtcgtttaatgttttaattaaggaaatgcaaggt
ctaggacttgatgttcgtcctatggtagtagatgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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