KEGG   Corynebacterium pseudotuberculosis 48252: CPTA_00452
Entry
CPTA_00452        CDS       T03482                                 
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cpse  Corynebacterium pseudotuberculosis 48252
Pathway
cpse03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cpse00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CPTA_00452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpse03400]
    CPTA_00452
Enzymes [BR:cpse01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CPTA_00452
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CPTA_00452
DNA repair and recombination proteins [BR:cpse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CPTA_00452
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AIG06281
Position
477146..477967
AA seq 273 aa
MMDSMPEGHVIHRLARELNKHFQGKAPRVTSPQGRFAAEAALIHAAPFYQAHAWGKHLFI
EFDAPTPERIVHIHLGLIGSLHFDPIEEAKGQIRLRIEGDKVAANLRGPQWCRLITTEEM
EVAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGIS
PFTPGREVENLGQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDHGGEVYVYR
RLGQPCYVCGTPISGQVMEGRNLFWCPTCQPRP
NT seq 822 nt   +upstreamnt  +downstreamnt
atgatggacagcatgccagaaggccatgtcatccaccggctcgcccgcgagctcaacaag
cattttcaaggaaaagcgccacgcgtcacatcccctcagggaagattcgccgcagaagca
gcacttatccacgccgctccgttttatcaggcccacgcatggggcaagcatcttttcatt
gaattcgatgcccccacgccagaacgcattgtgcatatccacttaggcctgatcggaagc
ctgcattttgacccgattgaagaggccaaggggcagatccgactacggatagagggtgac
aaagtagcagcaaatctacgaggaccacagtggtgtcgccttattacgacggaagagatg
gaggtagccgtcggcaagcttggtgcagacccgctgcgcccagactcagacctaagcctc
gtttgccagcgtgtcgcgcgttcacagagatcgatcggatcgttactcatggaccagcgg
ctttttgccggcgtggggaatatctaccgtgcggaatcgctctttcgcctggggataagc
ccctttacgcccggccgcgaagtggaaaatcttggccaaatatgggaagacttggtttat
ctcatgcaggagggggtgcgggtaggacgcatcgataccgtccgtcctgaacacactcct
caagccatgggccgagcaccccgtaaagacgaccatggcggagaggtctatgtgtatcgt
cgattgggccagccctgttatgtgtgcggcacacctatcagcgggcaagtaatggagggt
cgaaacctcttctggtgtcccacctgccagcctcgaccatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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