KEGG   Chlamydia psittaci GR9: B598_0148
Entry
B598_0148         CDS       T02309                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
cpsg  Chlamydia psittaci GR9
Pathway
cpsg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpsg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B598_0148 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpsg03021]
    B598_0148 (rho)
   03019 Messenger RNA biogenesis [BR:cpsg03019]
    B598_0148 (rho)
Transcription machinery [BR:cpsg03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     B598_0148 (rho)
Messenger RNA biogenesis [BR:cpsg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     B598_0148 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 AAA_22 OB_RNB AAA Mor DUF5855 NACHT
Other DBs
NCBI-ProteinID: AFS20243
Position
137547..138941
AA seq 464 aa
MKEERSSEVLPKVKENRKHACPGLQEKSFAGECAVVADVVNENQPVTITKIAKLQRMGIE
ELNVLARQYGVKNIGSLTKSQVVFEIVKAKSERSDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNERIVMEMGKEHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGKDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELEKVYLFRQAIADLTAIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaaagaagaacgttcttcagaagtcttgccaaaggtcaaagagaatagaaaacatgcg
tgtcctgggttgcaagagaagtcttttgcgggagaatgtgcagtagttgcggatgtagtg
aatgaaaatcaacctgtaactattacaaaaattgccaaattgcaaaggatgggaattgaa
gagcttaatgtattggctcgtcaatatggagtgaagaacatcgggtctctcactaaatct
caagtggtatttgagatcgttaaagcaaagtctgaacgttcagatgagcttttaatcggg
gaaggggttttggaagttcttcctgatgggtttggctttttaagatcacctacttataac
tatctcccttctgctgaagatatttatgtttccccagctcagattcgcagatttgattta
aagaagggagacacaattataggcaccatacgttctccaaaagagaaggaaaagtatttt
gccttattaaaggtagataagattaatggatctaccccagacaaagctaaggaacgagtt
ttattcgaaaacttgacccctctataccccaatgaaagaattgttatggaaatggggaag
gagcacctcgctgaacgggtgttagatcttacggcgcccatagggaaagggcaacgggga
cttattgtagctcctccacgttctggaaagacagtaattttacagagcatagcccacgct
attgcagtaaataatcctgatattgttctcattgttttgttaattgacgagcgcccagaa
gaagttaccgatatgattcgacaggtgcgtggtgaagttgttgcttctacgtttgatgag
cagcctgaaagacatattcaagttgcagaaatggttatagaaaaggctcgacgtctagtt
gaacacggaaaggatgtagtgattcttctcgattctattacacgtttagcgcgagcttac
aataccgtgcaaccacattctgggaagatcttaacaggaggcgtagacgcgagtgctcta
cataaacctaagagatttttcggagcagcaagaaatatcgaaggtggcggatcgttaacc
attttagctacagcgttgatagatactggttctagaatggatgaagtcattttcgaggag
ttcaaaggtacaggaaatatggaactggtactagatcgtcgcctttctgatcgaagaact
taccctgctattgatcttattaagagtggtacaagaaaagaagaattactctatcaccct
agtgaattagaaaaagtttaccttttccgacaggcaattgctgatcttactgctattgac
gctatgcatctgttgttaggtagattaaaaaagacaaatagtaacgcagagtttttactt
tctctaaaagaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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