KEGG T00168: cgd3

Cryptosporidium parvum: cgd3_3820

Entry

cgd3_3820 CDS T00168

Definition

DNA LIGASE I

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

cpv Cryptosporidium parvum

Pathway

cpv03030	DNA replication
cpv03410	Base excision repair
cpv03420	Nucleotide excision repair
cpv03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:cpv03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:cpv03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cpv03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:cpv03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

ApiDB_CryptoDB:

UniProt:

Position

AA seq 825 aa
MTGKCLDSLFNEEDDMNEIIETEDSIIDSKETIINEKISLDSILGRELMSNVKKDEKRSK
KIKLDSNIQQKLSFNFGTGNTPSSVNKSKPTKLEKVPENEESGDSCTKNGSESLSKKIKP
SNAGLFSPFSINITTGDEDIQSPMFDPCNISKEKIMAKGKSNSILFSVLTDAFSRIEQLK
GSGSGSKKGCIVILANLFRLIIHHNPSDLIDAVYICMNKVAPDYEGKESGVGDSILIKCI
SESSDKSEKRIKEDQISGKFEDLGEIAAICKKQMRLLFEPQRLTIHDVYSDLYSLTEITG
KQSQQLKKDKIKKLLVSGKQDEVKYIVRFLQGRLRIGIQQTTVYQALASAFVLTKNIPGD
NLASFSDYRLAKNEKKYKNLQELDCEILEMETSLRSSLCQLPNIEKIINVAIQGASSDEI
SAKCKLTTGIPCEPMLARPTKGIQDVLNRFENFLFTAEYKYDGERAQIHVYKDKSNKRVI
KIFTRNLESATDRYPDLIQYLNQSLNSSVEDCILDSEVVAYSKSEDKILPFQVLSTRKRK
NVAFDDIQIQICLMLFDCMGFNGESLLKKSLFERRQYLRKCINEGQSEYIKFTTSTETNK
LDHLDSFLSESIENNCEGLMVKTLHDNASYEPSKRSLNWLKIKKDYVDGLTDSIDVVPIA
ACYGKGKRNGVFGTFLLAVYNTEEEVYETVCKAGTGFSDEILQSLYTSLKDHIIAEGAPK
SYYKFDSSGQLSSLKQDVWFEPKFVWEVKGADLSLSPVHTAAIGTIDENRGIGLRFPRFI
RIRDDKSPEQATSSIQIMEMYNSQLITNNTKNETNFSDDQFQEDD

NT seq 2478 nt +upstreamnt +downstreamnt
atgaccggtaaatgcctagattcattatttaatgaggaagatgatatgaatgaaattatt
gaaacagaggattcaattatagattcaaaggaaacaattattaatgaaaaaatatcccta
gatagtattttaggaagagaattaatgagtaatgttaagaaagatgagaaaagatccaaa
aaaataaagttagactcaaatattcaacaaaagttatcgtttaattttgggactggaaac
acaccttctagtgttaataaaagtaagcctacaaagcttgagaaagttccagagaatgag
gaaagtggagattcttgtaccaagaatggatctgaaagtttaagtaaaaagataaaacct
agtaatgcaggcctcttttcaccattttctattaatattacaacaggagatgaagacatt
caaagtccaatgtttgatccttgtaatattagcaaggaaaagataatggcaaaagggaaa
agtaattcaatattattttctgtgttgactgatgccttttcaaggatagagcaactaaaa
ggaagtggatctggtagcaaaaagggttgtatagtaatcctagcaaatttatttcgactg
ataatacatcataatccaagtgatttaattgatgcagtttatatttgtatgaataaagtt
gctcctgattatgaagggaaagaatcaggagttggtgattctattctaataaaatgtata
tcagagtcttctgataagtcagagaagagaattaaagaggatcaaattagtggaaaattt
gaagatttaggtgaaattgcagcaatctgcaagaaacaaatgaggcttctttttgaacca
caaagattaacaatacacgatgtttatagtgacttgtattcacttacggagatcacaggt
aaacaatctcaacaacttaagaaagataagatcaagaaattattagtttctggcaaacag
gatgaagttaaatatatcgtaagatttttacagggaagattaagaattggaatacaacaa
accactgtttatcaggcattagcaagcgcatttgtgttaacaaagaatattccaggggat
aatttggctagtttttctgattatagacttgcaaaaaatgagaaaaaatataagaatcta
caagaattagattgcgaaatactcgaaatggaaacctcacttagatcatctctttgtcag
cttccaaatatcgaaaagatcattaatgttgccattcaaggagcctctagcgatgaaatt
tctgctaaatgcaaacttaccactggaataccttgcgaacctatgcttgcaagacctaca
aaaggcattcaagatgttctaaatagatttgaaaactttctttttactgctgagtataaa
tatgatggtgaaagagctcaaatacacgtatataaggacaaatctaataaaagagtgatt
aaaatcttcactcgtaatttagagtctgctactgataggtatccagatttgattcaatat
ttaaatcaatcactcaattcgagtgtagaagattgtattttagactctgaagttgttgca
tactctaaaagtgaggataagattttaccatttcaagttctgagtacaagaaaaagaaag
aatgttgcttttgatgatatacagatacaaatatgtttaatgctttttgattgcatgggg
tttaatggagaatctttactaaaaaagtcactctttgaaagaagacaatatttgagaaaa
tgtatcaatgagggtcaatctgagtatattaaatttactacaagtactgaaactaataaa
cttgatcatttagattctttcctttctgaatctattgaaaataattgtgagggactcatg
gttaagactttgcatgataatgcaagctatgaaccttcaaaaagatctcttaactggtta
aaaattaagaaagattatgtggatggacttactgatagtattgatgttgttcctattgca
gcatgttatggaaaaggtaaaagaaatggggtttttggaacttttctattagctgtttac
aatacagaggaggaggtatatgaaactgtatgtaaggcaggaacaggattttctgatgaa
attttacaatcgttatacacaagtttgaaagaccatattattgcagaaggtgccccaaaa
agttactataagtttgactcaagtggacaattatcttcactcaaacaagatgtttggttt
gaaccaaaatttgtatgggaagttaaaggtgctgatttatcactatctcctgtgcataca
gcagctataggcactattgatgaaaacagaggaataggacttcgatttccaagatttata
agaattagagatgataagtctccagaacaagctacttcatcaattcaaattatggaaatg
tataacagtcaattgataactaataatacaaagaacgagaccaatttcagtgatgatcaa
ttccaagaagatgattag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   APIDB_CRYPTODB-CPV (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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