KEGG   Cryptosporidium parvum: cgd4_1260
Entry
cgd4_1260         CDS       T00168                                 
Name
(RefSeq) possible tRNA-INTRON ENDONUCLEASE
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
cpv  Cryptosporidium parvum
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cpv03016]
    cgd4_1260
Enzymes [BR:cpv01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     cgd4_1260
Transfer RNA biogenesis [BR:cpv03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    cgd4_1260
SSDB
Motif
Pfam: tRNA_int_endo
Other DBs
NCBI-GeneID: 3372618
NCBI-ProteinID: XP_625723
ApiDB_CryptoDB: cgd4_1260
UniProt: Q5CQC5
Position
4:318148..318624
AA seq 158 aa
YYQTYENISNIYNKFQFNQENLILLKYIIYKYFKEKNYIVKDGMKFGVDYILYHKSPSLV
HGKHCILICKFTYEEKEKKKENGNNDYCYNKSDLSKYDGYEEIIYNNKKYMVKFPIINYK
KIINLSRLCESVSKKLILVEYNSKNDEIQSLEISRFSS
NT seq 477 nt   +upstreamnt  +downstreamnt
tactatcagacatatgaaaatatatctaatatttacaataaatttcagtttaatcaagaa
aatctaattctcttaaagtatataatatataaatactttaaagagaaaaactatatagtt
aaagatggaatgaaatttggagttgattatatattatatcataaaagtccatctctagtc
catggaaagcattgtatattaatttgtaaattcacatatgaagaaaaagaaaagaaaaaa
gaaaatggcaataatgattattgttataataaaagtgatctatcaaaatatgatggatat
gaagaaattatttacaataataaaaaatatatggtaaaatttcctattattaattataaa
aaaattattaatttatcgagattatgtgagtctgtttcaaaaaagcttattcttgttgaa
tataactccaaaaatgatgaaatccaaagtctagaaatttccagattttctagttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

Download RDF
DBGET integrated database retrieval system