KEGG   Cryptosporidium parvum: cgd6_2060
Entry
cgd6_2060         CDS       T00168                                 
Name
(RefSeq) cdc39p protein-like; C-terminal Not1, CCR4-Not complex component; Not1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
cpv  Cryptosporidium parvum
Pathway
cpv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    cgd6_2060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpv03019]
    cgd6_2060
Messenger RNA biogenesis [BR:cpv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     cgd6_2060
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     cgd6_2060
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind
Other DBs
NCBI-GeneID: 3376076
NCBI-ProteinID: XP_627566
ApiDB_CryptoDB: cgd6_2060
UniProt: Q5CX88
Position
6:476991..484985
AA seq 2664 aa
MVEKNLPCGEDIPKRQLFEIIKEIGPSSTSNQENFDEILLGWINDSSNFKRDIATSFIYM
LNDTSKYNKDPKYKEKGSDDFSEVLRARWNELSNNKNDQNLLVQSSREDIRLGWNSSVFV
EGVNKIMKIQESKNKQFNTNWNDIIDEIIDKSDLLDLTDNDGSFELFCSLLGESYRRDEN
KVYNPKCNELYYKLDPFLKEWKNPDIQALFLLKICKTSYEINNRSYNLHQKDYSNDILED
TLIENAVNFDSVYTNMSNYSIILDASSRIHNSIVSMFESDESILELIKDGLLGTPCDDIF
KSKLPKIGIFHTKGSCGLLICHDLLRVIINIYNRINNQRLLELLQHLIFYEIPRYSPIGL
LSSLGAIYDDFPQAVSVSSDLANKISESFDILVPNNKVTKVSLIKMAIYSAQEFILFPIS
KIVATSHEKEYDIGPRFGVIMQIIFASSEKHRNDNSQSQFMRDIISQIAFCYRISSVFLI
SKLNSLSRSYLWEFLDSEWKTLPQFYKMNVSDCLSQILSRDKLDLLKDSEYSHESIDYYH
WWFLCIDIVFSGISISQNSELGLSSSISDEISSRAVNVLFTLFKEELEGKNIETPLFIIA
IMDYIRARLVYMTYASAELQTILVNRRTSLPSFAVDKAASFKVFAARVVRRNLSLGSSQL
YQPKECWISSLETPSFKFSCWRISSSSILAIQEAILKFGVSIKGYESTPISELHDALLEF
EKIKDTNNLQDKNNSLGSIIKDVSSEIMLNSSVNEKDEKTLNNISQTLFTNNDSEHKNST
KINGKSELIEAENEGNGFEINHVNDFLTKCYSGEINTSELTVELKKMHSLSNHPGKNVKI
FNTFLQTLFDECRSYPKYPNQELKITAEILGILVKEDLLISFGNALVFVLRCIIEALRKG
HWTKMFCFGVFAMEMFIDRFISFPQFLSAIINMSQHLKHAIEPYVTYCESCIAILPENLK
NKLYIERSVMESLNLDIPPKPESLISKVHPEMINFEFRQKETSESPCKPNMSIDKLGSFI
TLNLSERKVLPTGITIDQLQGFGLGSLEKLMNDPEILNALVTPSENVIEHIFTICNTLAS
TNIETKAIEMADILNKNPEYCHWFAFYLVKNRASKEKNNHSTYINFLIKLDKLMPKNSDL
LLEEKTESDIPLTHKGNEESKINIIEITTLASYDCIKALLRYASILNEVSSFLNVLRHLG
YWLGQITIGINRPIIHKYLNPRQLLIDSYSRGCIASVLPFICKILENVKGGYYYPPNPWT
NNILYALAEIHSLANNSNSHMFEVELLFKQLELNLDDYVGKSNYLGLSSHTDYTEHKALG
EKQRGHNIYPKTQTEHNSHITLGSSFERPNITNNVINSSLNQSAGLYQLSANIGDAQLAS
TFMPPNHSSQMMHQQTPQQIPSSDIQFWANKVLISPSIVLFQIQPSLRPLVPLALDRSIR
EILQVVIPRSVRIAAITTKEIIGKEFAFEADENIYKRAAHLMVAALSGSMAIAACREPLR
VAFTAQLRQVLHPTPSRDGEDHVLIEQVVQVICSDNIDLGCQIIEQAVVEKAIEELDEVI
SPGIIARRKSRETGHQFVDTDFYGGPNTQNSATFWSSLPENLKYRHNSMRHLQLYKDFLQ
FTLMRNLERRDSVTQYELQNSLQSNQITSLYQHGSNDQFNSQTQQWNNSNAIQFSHQAES
IQNFNTVRSDNTSSQMPSSNHSQMNTSPSTIVQPPEPVRVPLVFELAYLPLMMRVDECLG
QIKDVIREIALYPPIFSKQLIPPVSNNLSEGMSVNQNIYSKPLGSNIFTYTPKSTAHPVL
SVLSSLQSDHILFYLCRVLYSIGKSASQREDVLIGISQKLFKTLFDAGAAFQQSTTGILP
SSRCIASSLGFDAALLHIEVFLALCNQISYYSSKFWLKLRKEAIGWFIYTIEDPKYSVDI
VIGALRYDLISSDELDVSLSNILETAISTLNDSNPAIGGNSRCLRIVEFIYKLFFRSIED
WHYPITKKLPSATKNLNRLSNNSVAFQNSNFSAIPIVLPGLYYKPYSYTTNLGELKNKVE
SILLELESNKSIKFHEMWIGDQCPEILNFYSVIQCNLDTILNPRYIALPTPIKPPPDISK
GINTIFDEWILLLRITIFNGVGGSERNNPYRNLFLQRLSRQGLLRMDDTTEKLFTACIER
AIYLSLNHNSSDSDALNNSISENANDSRNNMDPFPIDSLVRLITTMARYVDPQQMAAVVI
THKFLSILTRVIHKDAESHGFNQRPYYRIFYSLLQEYESIGFNTEMIHFTCILSVVHHLQ
YLNPNRVPGFAYSWIQIISSNRFFPYLLRHVKGWQPYQALLLQIFIFISPFLRSVQLSSN
IKTIYGALLRILLVLLHDFPEFLCDYSCSFCDVLPVNCIQIRNLILSAFPRNMKLPDPFL
PTLKIGNLPEMKLIPRMIANYGAYILYKDLKVNIDKFWITRDASILPLITETIKMPRDEA
LKCGTKYSFPIITGLLLYIGIYLPNGNESNSSIDGSHNGIFNIFNSDPSTNSIESASKLD
QTPNIKSDQLETFEDPSLSIILFLCKDLDMEGRFVLISAMTNFLGYPNSYTYYFSSLILW
LFSKSNDSIVQEQITRILLERLIVHRPHPWGLLITFIELIKNPKYAFWSCSFVHLAPEVE
KLFQSVAQTCLGQAPNKTNLVNHT
NT seq 7995 nt   +upstreamnt  +downstreamnt
atggtagaaaagaatctcccttgtggagaagatattcccaagcggcaactttttgaaata
ataaaggaaattggcccaagcagcacgtcaaatcaagaaaactttgatgagattcttcta
ggatggattaacgactcaagcaactttaaacgagatattgccacttcattcatttatatg
ctcaatgatacatcgaaatacaataaggatccaaagtataaagaaaaaggcagcgatgat
ttttctgaagttcttagagcaagatggaacgagctgagtaataacaaaaatgaccaaaat
ttattagttcaaagttctagagaagatattaggctgggttggaactcttccgtttttgtg
gaaggagtgaacaagataatgaaaattcaagagtccaagaataagcaatttaatactaat
tggaatgacattattgacgaaataattgataaaagtgacttactagatctaactgataat
gatggaagcttcgaattattttgttcacttttaggtgaatcatatcgaagggatgaaaat
aaagtttataacccaaaatgtaacgaactgtattataaattagacccttttttaaaagaa
tggaagaatcctgatattcaagctctttttcttttgaaaatctgtaaaacaagctatgaa
ataaataataggagttataatttgcatcaaaaggactattcaaatgatatattagaggat
acattaatagaaaatgcagtaaattttgattcagtctacacgaatatgagtaattactca
attatattagatgctagctcaaggattcacaattcgattgtttcaatgttcgaatcagac
gaatccattttggaactcattaaagatggtttactcggaaccccttgtgacgatatattt
aaatctaaattaccaaagattggaatctttcacactaaaggttcatgtggattattaatt
tgtcatgatttgctaagggtcattattaatatatataatcgaattaataatcagagatta
ttagaactccttcaacatcttattttttatgagattccaagatattcgcctattggccta
ctctcatctcttggagcaatttatgatgattttccacaagccgtttctgtatctagtgac
ctagctaacaagataagtgagtcgttcgatatattagtgccaaataataaagtcacgaag
gtttcgttgattaaaatggcaatttacagtgctcaagagtttattctatttcctatttct
aaaatagttgcaacttctcatgaaaaagaatatgatattggtcctcgttttggagtgatt
atgcaaatcattttcgcctcttcagagaaacataggaatgataatagccaatcccagttt
atgagagatattatcagccaaattgcattctgttacagaatttcatctgtttttctaatt
tcaaagttgaactccctttcgaggagctacctttgggagttcttggactctgaatggaag
accttacctcaattttataaaatgaatgtttctgattgtttatctcaaattttgtctaga
gataagcttgatttactgaaagattcagaatattctcatgaatcgatcgactattatcat
tggtggtttctttgtatcgatattgttttttctggaattagtatatctcaaaattccgaa
ttggggttgtcttctagtataagtgacgaaattagctctcgcgctgttaatgtccttttt
actctatttaaagaagaactagagggtaaaaatattgaaactccactatttattattgct
attatggactatatccgagccagacttgtatacatgacatacgcttcagctgaacttcaa
actattctagtaaatagaagaacatcattaccttcctttgcggttgataaagctgcaagt
tttaaagtttttgctgcaagagttgttcgtagaaatttatctttaggttcatctcaacta
tatcagcctaaagaatgctggatttcttcgcttgaaactccctcattcaagttttcctgt
tggcgtattagctcatcttctattctcgcgattcaagaagcaattttgaagtttggagta
agcattaaaggatatgaaagcacccctatatctgaacttcatgatgctttacttgaattt
gagaagattaaagatacaaataatttacaagataaaaataactctttgggctctattatt
aaagatgttagctccgaaattatgttgaattcttccgtaaatgagaaagatgaaaaaact
cttaataatatttcacaaactttattcaccaataacgattcagaacacaaaaactccaca
aaaattaatggtaaatctgaactgatagaggctgaaaatgaaggaaatggatttgaaatc
aatcatgtcaacgattttctgacaaaatgttattcaggtgaaattaacacctctgaatta
acagttgaattaaaaaaaatgcactctctttcaaaccacccaggtaaaaatgttaaaatc
ttcaacactttccttcaaacgttatttgatgaatgtagatcctatcctaaatatcctaat
caagagcttaaaattactgcagaaattcttgggattttagttaaagaggatctacttatt
tcatttggaaatgcactagtgtttgtattgcgatgtattatcgaagcacttagaaaagga
cattggaccaaaatgttttgttttggagtatttgctatggaaatgtttatagacagattt
atttctttcccccaatttctctctgcaataattaatatgtctcaacatttaaaacatgca
atagaaccgtatgttacttattgtgagtcttgtattgccatccttccagaaaatctaaag
aataagttatacattgaaaggagtgtaatggagtctcttaacttagatatcccaccaaaa
ccagagagtcttatttcaaaggtgcacccagagatgattaactttgaattcagacaaaag
gagactagcgaaagtccttgtaaaccaaatatgtctattgacaagcttggaagttttata
accttaaatctttcagaaaggaaggtgcttccaactggaattacaattgatcaacttcaa
ggctttggcttgggtagtttagaaaaattaatgaatgatcctgaaatattaaacgcacta
gtaactccctccgaaaatgtaattgaacacattttcacgatatgtaatactcttgcgagc
acgaacatcgaaactaaagctatcgaaatggctgatattctaaataaaaacccggaatat
tgtcattggtttgcgttttatctcgtgaagaatagggcatctaaggaaaagaataaccat
tctacatatatcaacttcttaattaagttggataaactgatgccaaaaaattcagattta
ctgctcgaggaaaaaactgagtcggatattccattaactcataaaggaaatgaggaaagt
aaaataaacatcattgaaattactactcttgccagttatgactgcattaaggctttgctg
cgatatgcaagtatattgaatgaggtctcctcattcttaaatgtactacgtcatttagga
tactggctagggcaaattacaataggaattaaccgtccgattatccacaaatacctaaat
cccagacaattgcttatagatagctattctagaggttgcatagcctctgtcctacctttt
atttgtaaaatattggagaatgttaaaggaggttactattatccgccaaacccttggaca
aacaatattttatatgcactagccgaaattcattcgcttgcgaataattcaaactctcat
atgttcgaggtagaacttttatttaagcaactggagcttaatctagatgattatgttggt
aagtcaaactacctaggtttgagcagccatacggactatactgagcataaggctctgggc
gaaaaacaaagaggtcataatatttatccaaagacccagacagagcataattctcacata
actttaggaagctcatttgagcgcccaaatattacaaataatgtaattaacagctcttta
aaccaatctgctggcttatatcaactaagtgcaaatattggagatgcacaacttgcttcg
accttcatgccacctaatcattcatcccaaatgatgcatcaacaaactccacagcagata
ccatcatccgacatacaattttgggccaacaaagtactaatttctccttctattgtatta
tttcagatacaaccatcgctcagacctttggtaccgctagctttagacagatcaataaga
gaaatactacaggttgtgattccaaggtcagttagaattgccgcaattactactaaagaa
attatcggtaaagaatttgcttttgaggctgatgaaaacatctataaaagagcagcccat
ctgatggttgccgctttatctggctctatggctattgcagcatgtcgtgaaccccttaga
gttgcatttactgctcaactaagacaagtattacacccaacaccatcgagagatggtgag
gaccatgtattaattgaacaagttgtccaagtcatttgcagtgataatattgatttaggt
tgccaaatcatcgaacaggccgtggttgaaaaagctattgaagaactagacgaagttatc
tctccaggaattattgcaaggaggaaatccagagaaaccgggcatcaattcgttgataca
gacttttatggaggaccgaacactcagaattccgctactttttggtcatcactacctgaa
aatttaaaatacagacataattctatgagacatttgcagctttataaagatttcttacaa
ttcaccttaatgagaaatttggaaaggagggattctgttacccaatatgagctacagaat
agtttacaatcaaatcaaataacatctctatatcagcatggaagtaatgaccaatttaat
agccaaacccaacaatggaataattctaatgcaattcaattttcacaccaagccgaaagt
atccaaaatttcaatacagttaggagtgacaatacaagctcccaaatgccttcttctaat
cattctcaaatgaatacctcgccttcaactattgtacaacctccggaacctgtaagggtg
cctcttgtttttgaattggcatatctgcctctaatgatgcgtgttgacgaatgtttgggt
caaataaaggatgtaatacgcgagattgccctatatcctccgattttctctaaacagctg
attcctccagtaagcaataatttaagcgaaggaatgtctgttaaccagaatatatactca
aaacctctcgggtctaatatttttacatatactccgaaatcaaccgcacatccagttctt
tctgtgttatcttctctccaatctgaccacattttattttatttatgcagagtattatat
tctattggaaaatctgcgtcacaaagagaagatgttttgattgggatctctcaaaaattg
tttaaaacactttttgatgcaggcgccgcctttcagcagagtacaacaggtatacttccc
tcgagtagatgtattgcctcttcacttggtttcgatgcagctttgttacatatcgaggta
tttctggcgctatgtaatcaaatttcgtattatagctcaaaattttggctgaagcttagg
aaagaggcaataggatggtttatttacactatagaggatccaaaatattccgttgatatt
gtaattggtgcattaagatatgatcttatctcctcagatgaacttgatgtttctctatca
aacattttagaaactgcaatttctacgcttaatgactctaatccagcaatcggtggaaat
agtagatgtttgagaattgtcgagtttatttacaaactgtttttcagaagtattgaagat
tggcactacccaattactaagaagttaccaagcgctactaaaaacttgaatcgattatca
aataacagtgtagccttccaaaacagtaatttttctgcaataccaatagtgctaccaggg
ctttattataagccatactcttatacaactaatcttggagaacttaagaataaagtagaa
agtattctattggaattggaatccaacaagtcaattaagtttcatgaaatgtggataggt
gaccaatgtccagagattttgaacttttactcagtaattcagtgtaatttggatacaata
ttgaacccgagatatattgcgttacctactcctattaaaccacctcctgatatttcgaaa
ggaatcaacacgatttttgatgagtggatattgctattgagaataacaatttttaatgga
gttggaggttccgagcgtaataatccatacagaaatttatttcttcaaaggctttctagg
caaggtctactaagaatggatgacactacagaaaaattatttactgcttgtattgagaga
gcaatctatttaagcttaaatcacaatagcagtgactcagacgccttgaataactctatt
tcggaaaatgcaaatgactcacgtaataatatggatccgttcccgatagattcattggtt
agattgattacaactatggcaaggtatgtagatccacagcaaatggctgcagtagtaata
actcacaaatttctttcaatacttactagagttattcataaagatgcagagtcacatggc
tttaatcaaaggccatattataggattttttactctttgttacaagaatatgaaagtata
ggattcaatactgaaatgatacactttacctgcattctaagtgtagttcatcaccttcaa
tatttaaatcctaatagagtccccggatttgcatattcttggatccagattatctcaagt
aaccgattcttcccgtacctactacgccatgtaaaaggttggcaaccttatcaagctcta
ttattgcaaatcttcatttttatatcgccattcttgagaagtgtacagctatcaagtaac
attaagacaatttatggtgcgctactccgtatccttctggtattactacacgactttcct
gagttcctttgtgactacagttgcagtttctgcgatgtcctgcctgttaactgcatacaa
attagaaacctaatcttatccgcattcccaagaaatatgaaactgcctgatccattttta
cccaccttgaaaattggaaatcttcccgaaatgaagctaatacccagaatgattgcaaat
tatggtgcttacattctatacaaggatctaaaggtaaatatagataaattctggattact
agagatgcatcaatccttcccctcataacagaaactatcaaaatgccaagggatgaagca
cttaaatgtggtactaaatactctttcccgataataacaggtttattgctttatattggg
atatacctcccgaatggaaatgaatctaattcaagcattgacggttctcataatgggata
tttaatatctttaattctgatccatcaactaactcgattgaatctgcatcgaaactggat
caaacaccaaacataaaaagtgatcaattagaaacttttgaagatccgtccctttcaata
attctatttctttgtaaggacctggatatggaagggcgttttgtcctcatatctgcaatg
acaaattttcttggatatcctaattcttacacatactactttagctcacttattttatgg
ttgttttccaaaagcaatgactctattgtgcaagaacaaatcacaaggatacttctagaa
aggcttatcgtgcacaggccacatccatggggtcttctaataacatttattgagttgatt
aagaatccaaaatacgcattttggagctgttcatttgtgcatctggctccggaggttgag
aagctctttcagtctgttgctcaaacttgtttaggtcaagcccctaataaaacgaatttg
gtgaaccatacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (95)   
   KEGG ORTHOLOGY (1)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APIDB_CRYPTODB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (106)   

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