KEGG   Coccidioides posadasii: CPC735_007480
Entry
CPC735_007480     CDS       T01332                                 
Name
(RefSeq) ATP-dependent rRNA helicase spb4, putative
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
cpw  Coccidioides posadasii
Brite
KEGG Orthology (KO) [BR:cpw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpw03009]
    CPC735_007480
Enzymes [BR:cpw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CPC735_007480
Ribosome biogenesis [BR:cpw03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    CPC735_007480
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII DUF3106
Other DBs
NCBI-GeneID: 9694203
NCBI-ProteinID: XP_003068720
UniProt: C5PA13
Position
Unknown
AA seq 653 aa
MASKKKERGPPPHSRSWQALTPPLSEWILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVE
AVTGSGKTMAFLIPVVEKLLRLEAPIKKHHVGAIIVSPTRELAEQIYKVLLSLLAFHAPS
AAAIQPSTSHETADGETILPFYPSSTLKVVPQLLLGGATTPAQDLSTFLKRSPNLFVSTP
GRLLELLSSPHVHCPQTSFEVLVLDEADRLLDLGFKDDLQKILARLPKQRRTGLFSATVS
DAVDQIIRVGLRNPVKIAVKVKGAPGTEEKRTPASLQMTYLLTRPSHKIPAIRQILNSID
NTPQKTILYFSTCAAVDYWSHVLPSLLPEIFVTLPLHGKHPPNVRQKNFSRFTNSVSPSV
LLTTDVAARGLDIPLVDLVIQFDPPTDPKAYLHRCGRAGRAGRRGLSVILLCPGREEDYI
PFLEVRKTPVSLLESPPVALSDTLATEATSKIRETVLRDRALHDKAQKAFVSWVRSYTKH
QASSIFRITDIDWEEAGRAWGLLKLPKMPELQKFSGDRTLGVTLDWDKYSYKDKQREKHR
QESLNSATTHNPLKRPAPSSSSNNDTAPWSKTLEKKSDKEKRRERKRAKKEREHWEKMTE
EEKTKSRETRQMLEELRKKNRQELNAKSHTSSSVLSKPQEAELDGESEFEGFD
NT seq 1962 nt   +upstreamnt  +downstreamnt
atggcatccaaaaagaaggagcgagggcctccgccgcattcccgctcttggcaggccctg
acgccgccgctgtcggaatggatcctcgacgccgttgcggcgatgggcttcacccgcatg
actcccgtccaggcgtcgacaatcccgctcttcatgggccacaaggatgtcgtcgtggag
gccgtgactggcagcgggaagaccatggcgtttttgatccccgtcgtcgagaagctccta
cgcctggaagctccgataaaaaagcaccacgtcggagctatcattgtctcgccaactaga
gagttagctgagcagatatataaagtccttctttccctcctcgcgttccacgcgccctcc
gctgcggccatacagccttcaacctcccatgagacggcagatggcgaaaccatccttccc
ttctatccctcctcgacactgaaagtagttccgcagctactccttggcggtgcaaccact
cccgctcaggatctaagtacatttttgaaacgctcgccgaacctctttgtctccactcct
ggcaggctcctcgaactcctttcctccccgcatgtacattgtcctcagacttcttttgaa
gttctcgtcctagatgaagccgacaggctactggatctagggttcaaggatgacctgcaa
aaaatacttgcccggctgccgaaacaaaggcgaaccggtttgttcagtgccaccgtgagc
gacgccgtagatcagatcatccgagttggtttgcggaatcccgtgaaaattgctgttaaa
gtaaaaggggcacctggcacagaagagaagcgtaccccggcaagtttgcagatgacatat
ctcctgacacgcccctctcataaaatccccgccatcaggcagatcctcaactcgatagat
aatacaccacagaaaactattctatacttttcgacatgtgctgcagtagactactggagc
cacgtcctaccctccctactccccgaaatattcgtcaccctaccccttcatggaaagcac
ccacctaatgtccgacaaaagaacttcagccgttttaccaattcagtatctccatcggtc
ttactaaccaccgatgtcgccgctcgaggattagatatcccgcttgttgacctggtaatc
cagtttgatccaccaacagatcctaaggcatacctccaccgatgcggtcgtgctggccgg
gctggacgtcgtggcctaagtgtcatattgctctgtcctggccgagaagaagattacata
cccttccttgaagtccgaaaaacacctgtatcacttcttgaatctcctccggtagcttta
tccgacactctcgcgacagaagcaacaagcaaaatccgggaaactgtccttcgtgaccgt
gcattgcacgacaaagcccagaaggccttcgtcagttgggtccgcagctacactaagcat
caagctagtagcatctttcgtatcacggacatagactgggaagaagcaggtcgcgcgtgg
ggcttgctcaagctgccgaaaatgccagagctgcagaagttctctggggacaggacactc
ggagtaaccctggactgggacaaatattcctacaaggataagcagcgagagaaacaccgt
caagaatctctaaactctgccacaacccataaccccctgaaacgccccgccccatcatcc
tcttcaaacaacgacacagcgccatggagcaagactctcgaaaagaaatccgacaaagaa
aaacggcgcgaacgcaaacgcgcaaagaaagagagagaacattgggagaagatgacggaa
gaagagaaaaccaaatctcgcgagacacgccagatgcttgaagagctccggaaaaagaac
cggcaagagctcaacgcaaaatcccacacttcttctagcgttctttcaaagccgcaagaa
gcggagctcgatggcgagtcggagttcgagggcttcgactaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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