KEGG T01332: CPC735

Coccidioides posadasii: CPC735_062390

Entry

CPC735_062390 CDS T01332

Definition

Transcription factor tfb2 family protein

Orthology

K03144

transcription initiation factor TFIIH subunit 4

Organism

cpw Coccidioides posadasii

Pathway

cpw03022	Basal transcription factors
cpw03420	Nucleotide excision repair

Module

cpw_M00290

Holo-TFIIH complex

Class

Genetic Information Processing; Transcription; Basal transcription factors [PATH:cpw03022]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:cpw03420]

SSDB

Motif

Pfam:

Tfb2 Helicase_C_3 SinI

Other DBs

NCBI-GI:

303321033

NCBI-GeneID:

9696006

UniProt:

C5P3U8

AA seq 487 aa
MPVSSSRPLEYLESLPGTVFLKLYQQPSTALAIFRRMLPHLAKCFVMALLYLKDPLPAAE
LELWVKAGSKRERDNALSILSRLHILSSTTTSDHVRAYMVTNPFSSSLRQALTGGDKQHS
FGVMSSMPDPHPMTVSDLDDYARRQWEGVLGYMVGTNSLGIQRENVTLSKGVKSLLQACH
LVEVRDRRVEITKEGFAFVLQDVNTQVWHILILYVENAEAIGMDSVEVLSFLFLLSSLEL
GQSYDKKHLTSTQLRTLADLTDFGIVYQHSPASESTRFYPTRLATTLTSDSMALSSPISG
NLAPAGPNINAATGAPGTGFIIIETNYRLYAYTSSPLQISLIALFTTLKYRFPNLVTGKL
TRQSIRRAVEMGITADQIISYLTTHAHPQMRKVNASKSTSTTAGLPASVLPPTVVDQIRL
WQLERDRLKATPGFLFKDFASSAEFEAPCRYAEEIGVLVWKSEKRRMFFVTRHEQVAAFL
RSRASRS

NT seq 1464 nt +upstreamnt +downstreamnt
atgcctgtttcttcgtcccgtcctctagagtatctagagagccttccgggcacagtcttc
ctcaagctgtatcagcagccttcaaccgctctggcaatctttcgccggatgctgccccat
ctagcaaaatgttttgtcatggcccttctctacctcaaagaccccctgccagcagctgag
ctcgagctgtgggtcaaggcaggaagcaagcgcgagagagacaacgccctgtcgatcctt
agtcgattacacattctttcaagcactacaacgtcggaccacgttagggcgtatatggtg
accaatccattttcctcctctctgcgacaggcgctcaccggcggagacaaacaacattct
tttggagttatgtctagtatgcctgatccgcaccctatgactgtctccgatctagacgat
tatgccaggcgacagtgggagggtgttcttgggtacatggtcgggacaaactcgctgggc
attcaacgtgaaaacgtaacgctgagtaaaggagtcaaatccctcctccaagcctgccac
cttgtcgaggtccgagatcgcagagtggaaatcaccaaggaagggtttgcctttgtattg
caagatgtcaatactcaggtctggcatattctcatcctctacgtcgagaacgccgaagcc
atcggaatggatagcgtcgaggtgctctcctttctcttcctcctcagtagcttggagcta
gggcaatcctacgacaaaaagcatctaacttcaacgcaactccgtacccttgccgacctc
actgatttcgggatcgtttaccaacattcccctgcttcggaatccacacgcttttaccct
actcgattagcaacaacgcttacatccgactccatggctctctccagcccgatctcaggc
aaccttgctccagctggtccaaacataaacgccgctactggtgcgccaggcacaggattc
ataatcatcgaaacaaactaccgcttatacgcgtatacctcttcccctcttcaaatttcc
ctcatcgcactcttcacaacacttaaataccgctttcccaaccttgttacgggaaagcta
acacgccaatccatccgtcgcgccgtcgaaatgggcatcactgccgaccaaataatatct
tacctcacgacccatgctcacccccagatgcgaaaagtaaacgcatcaaagtccacttca
accacagctggacttcctgcgtctgttctaccgcccacagtcgttgatcaaatccggctc
tggcagttagaacgtgataggctgaaggccacaccaggatttttgttcaaagatttcgca
tcttcggcggagtttgaagccccgtgccggtacgcagaggaaatcggtgttttagtttgg
aaatcagagaaacgaagaatgttctttgtcacgagacatgagcaagtcgccgcttttttg
agaagtagagcctctagaagttga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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